dandiarchive-dataset/s3://dandiarchive/dandisets/000944/draft/dandiset.yaml

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access:
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  status: dandi:EmbargoedAccess
assetsSummary:
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citation: Arkhipov, Anton; Garrett, Marina; Groblewski, Peter; Zobeiri, Omid; Dai,
  Kael; Willford, Ali; Caldejon, Shiella; Seid, Sam; Berry, Carson (2024) Two-photon
  calcium imaging of responses of Layer 2/3 excitatory neurons to drifting gratings
  and natural movies in the mouse visual cortex (Version draft) [Data set]. DANDI
  archive. https://dandiarchive.org/dandiset/000944/draft
contributor:
- email: antona@alleninstitute.org
  identifier: 0000-0003-1106-8310
  includeInCitation: true
  name: Arkhipov, Anton
  roleName:
  - dcite:ContactPerson
  - dcite:ProjectLeader
  schemaKey: Person
- email: marinag@alleninstitute.org
  identifier: 0000-0002-5271-2291
  includeInCitation: true
  name: Garrett, Marina
  roleName:
  - dcite:ProjectLeader
  schemaKey: Person
- email: peterg@alleninstitute.org
  includeInCitation: true
  name: Groblewski, Peter
  roleName:
  - dcite:Producer
  schemaKey: Person
- email: omid.zobeiri@alleninstitute.org
  identifier: 0000-0002-1813-1354
  includeInCitation: true
  name: Zobeiri, Omid
  roleName:
  - dcite:Researcher
  schemaKey: Person
- email: kaeld@alleninstitute.org
  identifier: 0000-0002-2147-5895
  includeInCitation: true
  name: Dai, Kael
  roleName:
  - dcite:Software
  schemaKey: Person
- email: aliw@alleninstitute.org
  includeInCitation: true
  name: Willford, Ali
  roleName:
  - dcite:Producer
  schemaKey: Person
- email: shiellac@alleninstitute.org
  includeInCitation: true
  name: Caldejon, Shiella
  roleName:
  - dcite:Producer
  schemaKey: Person
- email: sams@alleninstitute.org
  includeInCitation: true
  name: Seid, Sam
  roleName:
  - dcite:Validation
  schemaKey: Person
- email: carson.berry@alleninstitute.org
  identifier: 0000-0002-5905-8202
  includeInCitation: true
  name: Berry, Carson
  roleName:
  - dcite:Software
  schemaKey: Person
- awardNumber: 1 U01 MH 130907-02
  name: National Institutes of Health (NIH)
  roleName:
  - dcite:Funder
  schemaKey: Organization
dateCreated: '2024-03-29T21:40:14.461383+00:00'
description: 'This dataset contains recordings of neural activity using two-photon
  calcium imaging from the mouse primary visual cortex (VISp). The mice had GCaMP6f
  expressed in their Layer 2/3 excitatory neurons (Cux2). The experiments were conducted
  using the same data collection pipeline as the Allen Brain Observatory (de Vries
  et al., Nature Neurosci., 2020), with an improved microscopy system that uses multi-plane
  imaging. A camera-based eye tracking system and running wheel were used to track
  pupil dynamics and locomotion. The recordings were performed during two different
  visual stimulus sets: 1. STAGE_0: Natural movie clips. 2. STAGE_1: Drifting gratings
  presented as full-field stimuli (approximately 120x90 degrees of visual space).
  These gratings were presented in 8 directions, at 5 contrasts (5%, 10%, 20%, 40%,
  80%), as well as 8 directions, and 5 temporal frequencies (0.5, 1, 2, 4, 8 Hz).'
ethicsApproval: []
id: DANDI:000944/draft
identifier: DANDI:000944
keywords:
- mouse
- 2-photon calcium imaging
- visual cortex
- excitatory
- Layer 2/3
- Cux2
license:
- spdx:CC-BY-4.0
manifestLocation:
- https://api.dandiarchive.org/api/dandisets/000944/versions/draft/assets/
name: Two-photon calcium imaging of responses of Layer 2/3 excitatory neurons to drifting
  gratings and natural movies in the mouse visual cortex
protocol: []
relatedResource: []
repository: https://dandiarchive.org
schemaKey: Dandiset
schemaVersion: 0.6.7
studyTarget:
- To charactrize the contrast/temporal frequency tuning of different cell types in
  the mouse visual cortex
url: https://dandiarchive.org/dandiset/000944/draft
version: draft
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