Distributed Archives for Neurophysiology Data Integration (DANDI)

Stream data with DDA:

from dagshub.streaming import DagsHubFilesystem

fs = DagsHubFilesystem(".", repo_url="https://dagshub.com/DagsHub-Datasets/dandiarchive-dataset")

fs.listdir("s3://dandiarchive")

Description:

DANDI is a public archive of neurophysiology datasets, including raw and processed data, and associated software containers. Datasets are shared according to a Creative Commons CC0 or CC-BY licenses. The data archive provides a broad range of cellular neurophysiology data. This includes electrode and optical recordings, and associated imaging data using a set of community standards: NWB:N - NWB:Neurophysiology, BIDS - Brain Imaging Data Structure, and NIDM - Neuro Imaging Data Model. Development of DANDI is supported by the National Institute of Mental Health.

Contact:

DANDI is a public archive of neurophysiology datasets, including raw and processed data, and associated software containers. Datasets are shared according to a Creative Commons CC0 or CC-BY licenses. The data archive provides a broad range of cellular neurophysiology data. This includes electrode and optical recordings, and associated imaging data using a set of community standards: NWB:N - NWB:Neurophysiology, BIDS - Brain Imaging Data Structure, and NIDM - Neuro Imaging Data Model. Development of DANDI is supported by the National Institute of Mental Health.

Update Frequency:

New datasets deposited every month

Managed By:

https://www.dandiarchive.org/team

Resources:

1. resource:
   • Description: All datasets
   • ARN: arn:aws:s3:::dandiarchive
   • Region: us-east-2
   • Type: S3 Bucket

Tags:

aws-pds, biology, cell imaging, electrophysiology, life sciences, infrastructure, neuroimaging, neurophysiology, neuroscience

Tools & Applications:

1. tools & applications:

   • Title: DANDI Web Interface
   • URL: https://dandiarchive.org/
   • AuthorName: DANDI Project
   • AuthorURL: https://dandiarchive.org/

2. tools & applications:

   • Title: DANDI Shell Interface
   • URL: https://github.com/dandi/dandi-cli
   • AuthorName: DANDI Project
   • AuthorURL: https://dandiarchive.org/

3. tools & applications:

   • Title: DANDI JupyterHub Interface
   • URL: https://hub.dandiarchive.org/
   • AuthorName: DANDI Project
   • AuthorURL: https://dandiarchive.org/