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preprocess_smells:
cmd: bash data-preprocessing/smells.sh
deps:
- path: data-preprocessing/smells.sh
md5: 1792bc2011c1aba4d51cdca74beee11e
size: 2148
- path: downloaded-data/smells-madeyski.csv
md5: 3d60d277b9fa1306c05ccfdefe22e9d1
size: 7513770
outs:
- path: data/smells/test.csv
md5: 0200db0eec17554a48a5b3a25719fd03
size: 77607
- path: data/smells/train.csv
md5: 7fc9a7617e6f201523fba311317ba48f
size: 296970
parse_labels:
cmd: bohr parse-labels
deps:
- path: labels
md5: 2bdf7e3a52cf1d386b1edfc4558f2f55.dir
size: 552
nfiles: 3
outs:
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
smells_apply_heuristics:
cmd: bohr apply-heuristics smells
deps:
- path: data/smells/test.csv
md5: 0200db0eec17554a48a5b3a25719fd03
size: 77607
- path: data/smells/train.csv
md5: 7fc9a7617e6f201523fba311317ba48f
size: 296407
- path: datasets/smells-test.py
md5: daa3847137b86b014e68ceb421d9d61b
size: 290
- path: datasets/smells-train.py
md5: 5d0c1107da7c0fa3cf9278309d6a1e60
size: 292
- path: heuristics
md5: 5d211ace47541889824b572203481a3c.dir
size: 9059
nfiles: 8
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.2.8
outs:
- path: generated/smells/analysis_datasets.smells-test.csv
md5: 0e9a0cb4bca25888a4c21bb79dd903fc
size: 337
- path: generated/smells/analysis_train.csv
md5: fbb491949031407029f57e7089a123ca
size: 252
- path: generated/smells/heuristic_matrix_datasets.smells-test.pkl
md5: e02374e512c2a8965efc1c5e8b07af81
size: 6160
- path: generated/smells/heuristic_matrix_train.pkl
md5: 34d9fda2129d72f64c1564c5c5931347
size: 24313
- path: metrics/smells/analysis_datasets.smells-test.json
md5: b210737d114c81d670a7b5d49a99a250
size: 1119
- path: metrics/smells/analysis_train.json
md5: 4d96593b82baf44b775be1d171c73358
size: 698
- path: metrics/smells/heuristic_metrics.json
md5: 59fcc0b82a6620603434cb79ddb88422
size: 180
smells_train_label_model:
cmd: bohr train-label-model smells datasets.smells-train
deps:
- path: data/smells/test.csv
md5: 0200db0eec17554a48a5b3a25719fd03
size: 77607
- path: datasets/smells-test.py
md5: daa3847137b86b014e68ceb421d9d61b
size: 290
- path: generated/smells/heuristic_matrix_datasets.smells-test.pkl
md5: 03cfd9383f0463c0be0c15d54690b8ab
size: 4230
- path: generated/smells/heuristic_matrix_datasets.smells-train.pkl
md5: d353c8b3bbcec3442b88fa4e64056d68
size: 14312
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/smells/label_model.pkl
md5: c79b87e62b0004aa52ddebc1a6d562c7
size: 4900
- path: metrics/smells/label_model_metrics.json
md5: 709f017913491c39539f9b59fc88fb83
size: 102
preprocess_bugginess_train:
cmd: 7z x downloaded-data/bugginess_train.7z -odata/bugginess
deps:
- path: downloaded-data/bugginess_train.7z
md5: d4dc26c2b0f0704b1559f2c0ce6320d7
size: 255969433
outs:
- path: data/bugginess/train/bug_sample.csv
md5: 582037a749ed69771b87d7fc86ae04b8
size: 58465759
- path: data/bugginess/train/bug_sample_files.csv
md5: 7dc7360abeaff8685958a5ec1497990a
size: 2335330420
- path: data/bugginess/train/bug_sample_issues.csv
md5: 3aedc8183250c0d1f524a39ba2839140
size: 95930368
preprocess_bugginess_test:
cmd: cp downloaded-data/{1151-commits.csv,berger.csv,herzig.csv} data/bugginess/test
deps:
- path: downloaded-data/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: downloaded-data/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: downloaded-data/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
outs:
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
bugginess_apply_heuristics:
cmd: bohr apply-heuristics bugginess
deps:
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
- path: data/bugginess/train/bug_sample.csv
md5: 582037a749ed69771b87d7fc86ae04b8
size: 58465759
- path: data/bugginess/train/bug_sample_files.csv
md5: 7dc7360abeaff8685958a5ec1497990a
size: 2335330420
- path: data/bugginess/train/bug_sample_issues.csv
md5: 3aedc8183250c0d1f524a39ba2839140
size: 95930368
- path: datasets/1151-commits.py
md5: a2bb6e9da60192fadaa7a9e724a8878d
size: 347
- path: datasets/berger.py
md5: 3b08d66f821df196a060856de822c867
size: 341
- path: datasets/bugginess-train.py
md5: e436471ca99cb8e8a253c94de22ce757
size: 489
- path: datasets/herzig.py
md5: 18bd96fca060f555d99bd3a11b41bca9
size: 341
- path: heuristics
md5: 5d211ace47541889824b572203481a3c.dir
size: 4986
nfiles: 8
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.2.8
outs:
- path: generated/bugginess/analysis_datasets.1151-commits.csv
md5: 6b7c650110d6563e65fa473d1fddf74e
size: 23875
- path: generated/bugginess/analysis_datasets.berger.csv
md5: d1f3ec4548db935ec62e5a17f3dbf618
size: 21262
- path: generated/bugginess/analysis_datasets.herzig.csv
md5: fcee3c6b6438ea980997a72a9e7d0f2d
size: 25327
- path: generated/bugginess/analysis_train.csv
md5: 99158b53a853fc5310072b015739eeb7
size: 29097
- path: generated/bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: 7d34790f13136ee0bd47866fe7cb4f26
size: 5546034
- path: generated/bugginess/heuristic_matrix_datasets.berger.pkl
md5: b20eb135ea1f1a7a121f4041700b76ff
size: 1806306
- path: generated/bugginess/heuristic_matrix_datasets.herzig.pkl
md5: 89cff9e5cfba30fd7ab8a46a40635abd
size: 25125298
- path: generated/bugginess/heuristic_matrix_train.pkl
md5: 408324edd0a83ec3cb3aeaf1f1873ee5
size: 997067484
- path: metrics/bugginess/analysis_datasets.1151-commits.json
md5: c72120d3d7a8d250c07180af057a667c
size: 107877
- path: metrics/bugginess/analysis_datasets.berger.json
md5: b447290a7685292b52b053dbbd4f3782
size: 104758
- path: metrics/bugginess/analysis_datasets.herzig.json
md5: 4fc3ba6a0033cff0441c931cf9be685a
size: 109593
- path: metrics/bugginess/analysis_train.json
md5: b5dbf81969db76cef43b7783685067cd
size: 76922
- path: metrics/bugginess/heuristic_metrics.json
md5: e090404e414fc032b3f7921e373b2801
size: 393
bugginess_label_dataset:
cmd: bohr label-dataset bugginess datasets.bugginess-train
deps:
- path: data/bugginess/train/bug_sample.csv
md5: 582037a749ed69771b87d7fc86ae04b8
size: 58465759
- path: data/bugginess/train/bug_sample_files.csv
md5: 7dc7360abeaff8685958a5ec1497990a
size: 2335330420
- path: data/bugginess/train/bug_sample_issues.csv
md5: 3aedc8183250c0d1f524a39ba2839140
size: 95930368
- path: datasets/bugginess-train.py
md5: e436471ca99cb8e8a253c94de22ce757
size: 489
- path: generated/bugginess/heuristic_matrix_train.pkl
md5: 408324edd0a83ec3cb3aeaf1f1873ee5
size: 997067484
params:
bohr.json:
bohr_framework_version: 0.2.8
outs:
- path: labeled-data/bugginess.csv
md5: bfe4ac306c08f7188e094acc20e1ff03
size: 61623779
bugginess_train_label_model:
cmd: bohr train-label-model bugginess datasets.bugginess-train
deps:
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
- path: datasets/1151-commits.py
md5: a2bb6e9da60192fadaa7a9e724a8878d
size: 347
- path: datasets/berger.py
md5: 3b08d66f821df196a060856de822c867
size: 341
- path: datasets/herzig.py
md5: 18bd96fca060f555d99bd3a11b41bca9
size: 341
- path: generated/bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: 7842af0b57b43d1557796fe07a23cf13
size: 2792588
- path: generated/bugginess/heuristic_matrix_datasets.berger.pkl
md5: e9396acb35a49d225aadb0c22f1c64f9
size: 917772
- path: generated/bugginess/heuristic_matrix_datasets.bugginess-train.pkl
md5: d9141b7bf8b3eb25cf3e90490acbb812
size: 500879984
- path: generated/bugginess/heuristic_matrix_datasets.herzig.pkl
md5: ac1c03e92d33c156152e5c0fcd965423
size: 12608796
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/bugginess/label_model.pkl
md5: c43908471786ab37acf28b4430128d73
size: 1863238
- path: metrics/bugginess/label_model_metrics.json
md5: ba3b00b9b5834671eb30872a63884630
size: 286
smells_label_dataset:
cmd: bohr label-dataset smells datasets.smells-train
deps:
- path: data/smells/train.csv
md5: 7fc9a7617e6f201523fba311317ba48f
size: 296407
- path: datasets/smells-train.py
md5: 5d0c1107da7c0fa3cf9278309d6a1e60
size: 292
- path: generated/smells/heuristic_matrix_train.pkl
md5: 34d9fda2129d72f64c1564c5c5931347
size: 24313
params:
bohr.json:
bohr_framework_version: 0.2.8
outs:
- path: labeled-data/smells.csv
md5: d33b91c10a14f2ee2b784fd882153c5c
size: 305190
bugginess_transformer_train:
cmd: bash classifiers/bugginess-transformer/train.sh labeled-data/bugginess.csv
deps:
- path: classifiers/bugginess-transformer/run.py
md5: faf5ebb8f0348b28aa1205e2c56cd41c
size: 12023
- path: classifiers/bugginess-transformer/train.sh
md5: 3a19e011c049042bbec7e8315e883c38
size: 557
- path: labeled-datasets/datasets.bugginess-train.labeled.csv
md5: bfe4ac306c08f7188e094acc20e1ff03
size: 61623779
- path: requirements.txt
md5: 29b4c5d66c523cec0712dbcdcced42bb
size: 21
outs:
- path: models/config.json
md5: 3effd3229ade2ed52eeb90d252790bf5
size: 716
- path: models/merges.txt
md5: fb9c1e34b6999f3a062df6ed4a604957
size: 458459
- path: models/pytorch_model.bin
md5: 40379a0207d19e2a24e116e941d7d675
size: 333858922
- path: models/special_tokens_map.json
md5: 17bb9e090d1d3a775683aba3ba610591
size: 239
- path: models/tokenizer_config.json
md5: e1a3e947aa301aadc524ee29f0dbcc39
size: 1257
- path: models/training_args.bin
md5: 408c3f12467908cabb77ded5ce3490ed
size: 2159
- path: models/vocab.json
md5: ca70df26ed267d27a9edde9c5341f17b
size: 813062
bugginess_transformer_test_1151-commits:
cmd: bash classifiers/bugginess-transformer/test.sh data/bugginess/test/1151-commits.csv
metrics/bugginess/transformer/1151-commits
deps:
- path: classifiers/bugginess-transformer/run.py
md5: faf5ebb8f0348b28aa1205e2c56cd41c
size: 12023
- path: classifiers/bugginess-transformer/test.sh
md5: 92c4020b4c026f9b85fd38ddee1bd528
size: 313
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: models/config.json
md5: 3effd3229ade2ed52eeb90d252790bf5
size: 716
- path: models/merges.txt
md5: fb9c1e34b6999f3a062df6ed4a604957
size: 458459
- path: models/pytorch_model.bin
md5: 40379a0207d19e2a24e116e941d7d675
size: 333858922
- path: models/special_tokens_map.json
md5: 17bb9e090d1d3a775683aba3ba610591
size: 239
- path: models/tokenizer_config.json
md5: e1a3e947aa301aadc524ee29f0dbcc39
size: 1257
- path: models/training_args.bin
md5: 408c3f12467908cabb77ded5ce3490ed
size: 2159
- path: models/vocab.json
md5: ca70df26ed267d27a9edde9c5341f17b
size: 813062
- path: requirements.txt
md5: 29b4c5d66c523cec0712dbcdcced42bb
size: 21
outs:
- path: metrics/bugginess/transformer/1151-commits/eval_results.txt
md5: 52b1b36d2896195e78ca5b7d42de4839
size: 146
bugginess_transformer_test_berger:
cmd: bash classifiers/bugginess-transformer/test.sh data/bugginess/test/berger.csv
metrics/bugginess/transformer/berger
deps:
- path: classifiers/bugginess-transformer/run.py
md5: faf5ebb8f0348b28aa1205e2c56cd41c
size: 12023
- path: classifiers/bugginess-transformer/test.sh
md5: 92c4020b4c026f9b85fd38ddee1bd528
size: 313
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: models/config.json
md5: 3effd3229ade2ed52eeb90d252790bf5
size: 716
- path: models/merges.txt
md5: fb9c1e34b6999f3a062df6ed4a604957
size: 458459
- path: models/pytorch_model.bin
md5: 40379a0207d19e2a24e116e941d7d675
size: 333858922
- path: models/special_tokens_map.json
md5: 17bb9e090d1d3a775683aba3ba610591
size: 239
- path: models/tokenizer_config.json
md5: e1a3e947aa301aadc524ee29f0dbcc39
size: 1257
- path: models/training_args.bin
md5: 408c3f12467908cabb77ded5ce3490ed
size: 2159
- path: models/vocab.json
md5: ca70df26ed267d27a9edde9c5341f17b
size: 813062
- path: requirements.txt
md5: 29b4c5d66c523cec0712dbcdcced42bb
size: 21
outs:
- path: metrics/bugginess/transformer/berger/eval_results.txt
md5: 30da05826f977ee9b867560731091915
size: 144
bugginess_transformer_test_herzig:
cmd: bash classifiers/bugginess-transformer/test.sh data/bugginess/test/herzig.csv
metrics/bugginess/transformer/herzig
deps:
- path: classifiers/bugginess-transformer/run.py
md5: faf5ebb8f0348b28aa1205e2c56cd41c
size: 12023
- path: classifiers/bugginess-transformer/test.sh
md5: 92c4020b4c026f9b85fd38ddee1bd528
size: 313
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
- path: models/config.json
md5: 3effd3229ade2ed52eeb90d252790bf5
size: 716
- path: models/merges.txt
md5: fb9c1e34b6999f3a062df6ed4a604957
size: 458459
- path: models/pytorch_model.bin
md5: 40379a0207d19e2a24e116e941d7d675
size: 333858922
- path: models/special_tokens_map.json
md5: 17bb9e090d1d3a775683aba3ba610591
size: 239
- path: models/tokenizer_config.json
md5: e1a3e947aa301aadc524ee29f0dbcc39
size: 1257
- path: models/training_args.bin
md5: 408c3f12467908cabb77ded5ce3490ed
size: 2159
- path: models/vocab.json
md5: ca70df26ed267d27a9edde9c5341f17b
size: 813062
- path: requirements.txt
md5: 29b4c5d66c523cec0712dbcdcced42bb
size: 21
outs:
- path: metrics/bugginess/transformer/herzig/eval_results.txt
md5: bd726240700dac6e926d5532eb76c5c4
size: 145
smells_apply_heuristics_heuristics_smells:
cmd: bohr apply-heuristics smells --heuristic-group heuristics.smells
deps:
- path: data/smells/test.csv
md5: 0200db0eec17554a48a5b3a25719fd03
size: 77607
- path: data/smells/train.csv
md5: 7fc9a7617e6f201523fba311317ba48f
size: 296970
- path: datasets/smells-test.py
md5: daa3847137b86b014e68ceb421d9d61b
size: 290
- path: datasets/smells-train.py
md5: 5d0c1107da7c0fa3cf9278309d6a1e60
size: 292
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: heuristics/smells.py
md5: 3d03392a1e7d0b9bfaab0125dabfd5b6
size: 719
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.0
outs:
- path: generated/smells/heuristics.smells/analysis_datasets.smells-test.csv
md5: 0e9a0cb4bca25888a4c21bb79dd903fc
size: 337
- path: generated/smells/heuristics.smells/analysis_datasets.smells-train.csv
md5: fbb491949031407029f57e7089a123ca
size: 252
- path: generated/smells/heuristics.smells/heuristic_matrix_datasets.smells-test.pkl
md5: 143760b1cdf4c422a3430c583345337c
size: 4230
- path: generated/smells/heuristics.smells/heuristic_matrix_datasets.smells-train.pkl
md5: 5e0fb0ce062af88c8d2b5360948bb3c9
size: 14312
- path: metrics/smells/heuristics.smells/analysis_datasets.smells-test.json
md5: b210737d114c81d670a7b5d49a99a250
size: 1119
- path: metrics/smells/heuristics.smells/analysis_datasets.smells-train.json
md5: 4d96593b82baf44b775be1d171c73358
size: 698
- path: metrics/smells/heuristics.smells/heuristic_metrics.json
md5: 1e171274949b906e0c4dc9716a83859a
size: 169
smells_combine_heuristics:
cmd: bohr apply-heuristics smells
deps:
- path: generated/smells/heuristics.smells/heuristic_matrix_datasets.smells-test.pkl
md5: 143760b1cdf4c422a3430c583345337c
size: 4230
- path: generated/smells/heuristics.smells/heuristic_matrix_datasets.smells-train.pkl
md5: 5e0fb0ce062af88c8d2b5360948bb3c9
size: 14312
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/smells/analysis_datasets.smells-test.csv
md5: 0e9a0cb4bca25888a4c21bb79dd903fc
size: 337
- path: generated/smells/analysis_datasets.smells-train.csv
md5: fbb491949031407029f57e7089a123ca
size: 252
- path: generated/smells/heuristic_matrix_datasets.smells-test.pkl
md5: 03cfd9383f0463c0be0c15d54690b8ab
size: 4230
- path: generated/smells/heuristic_matrix_datasets.smells-train.pkl
md5: d353c8b3bbcec3442b88fa4e64056d68
size: 14312
- path: metrics/smells/analysis_datasets.smells-test.json
md5: b210737d114c81d670a7b5d49a99a250
size: 1119
- path: metrics/smells/analysis_datasets.smells-train.json
md5: 4d96593b82baf44b775be1d171c73358
size: 698
- path: metrics/smells/heuristic_metrics_datasets.smells-test.json
md5: 7fe3f867a78993a1e5e27178ba30b57b
size: 73
- path: metrics/smells/heuristic_metrics_datasets.smells-train.json
md5: 3e6a9fc4c1202a8c31e3c1980abfbabe
size: 32
smells_label_dataset_datasets_smells-train:
cmd: bohr label-dataset smells datasets.smells-train
deps:
- path: data/smells/train.csv
md5: 7fc9a7617e6f201523fba311317ba48f
size: 296407
- path: datasets/smells-train.py
md5: 5d0c1107da7c0fa3cf9278309d6a1e60
size: 292
- path: generated/smells/heuristic_matrix_datasets.smells-train.pkl
md5: d353c8b3bbcec3442b88fa4e64056d68
size: 14312
- path: generated/smells/label_model.pkl
md5: c79b87e62b0004aa52ddebc1a6d562c7
size: 4900
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: labeled-datasets/datasets.smells-train.labeled.csv
md5: d33b91c10a14f2ee2b784fd882153c5c
size: 305190
smells_label_dataset_datasets_smells-test:
cmd: bohr label-dataset smells datasets.smells-test
deps:
- path: data/smells/test.csv
md5: 0200db0eec17554a48a5b3a25719fd03
size: 77607
- path: datasets/smells-test.py
md5: daa3847137b86b014e68ceb421d9d61b
size: 290
- path: generated/smells/heuristic_matrix_datasets.smells-test.pkl
md5: 03cfd9383f0463c0be0c15d54690b8ab
size: 4230
- path: generated/smells/label_model.pkl
md5: c79b87e62b0004aa52ddebc1a6d562c7
size: 4900
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: labeled-datasets/datasets.smells-test.labeled.csv
md5: fc7c76d237aeb7f9900359ab625c27f7
size: 79736
bugginess_apply_heuristics_heuristics_bugginess:
cmd: bohr apply-heuristics bugginess --heuristic-group heuristics.bugginess
deps:
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
- path: data/bugginess/train/bug_sample.csv
md5: 582037a749ed69771b87d7fc86ae04b8
size: 58465759
- path: data/bugginess/train/bug_sample_files.csv
md5: 7dc7360abeaff8685958a5ec1497990a
size: 2335330420
- path: data/bugginess/train/bug_sample_issues.csv
md5: 3aedc8183250c0d1f524a39ba2839140
size: 95930368
- path: datasets/1151-commits.py
md5: a2bb6e9da60192fadaa7a9e724a8878d
size: 347
- path: datasets/berger.py
md5: 3b08d66f821df196a060856de822c867
size: 341
- path: datasets/bugginess-train.py
md5: e436471ca99cb8e8a253c94de22ce757
size: 489
- path: datasets/herzig.py
md5: 18bd96fca060f555d99bd3a11b41bca9
size: 341
- path: heuristics/bugginess.py
md5: 490e014b45c01afc68132c322cf2af78
size: 2897
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.0
outs:
- path: generated/bugginess/heuristics.bugginess/analysis_datasets.1151-commits.csv
md5: 6b7c650110d6563e65fa473d1fddf74e
size: 23875
- path: generated/bugginess/heuristics.bugginess/analysis_datasets.berger.csv
md5: d1f3ec4548db935ec62e5a17f3dbf618
size: 21262
- path: generated/bugginess/heuristics.bugginess/analysis_datasets.bugginess-train.csv
md5: 99158b53a853fc5310072b015739eeb7
size: 29097
- path: generated/bugginess/heuristics.bugginess/analysis_datasets.herzig.csv
md5: fcee3c6b6438ea980997a72a9e7d0f2d
size: 25327
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: cde4712cd3c7d97a01d472a96001655f
size: 2792588
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.berger.pkl
md5: e0369bc6d68aa85165b5a13925542d15
size: 917772
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.bugginess-train.pkl
md5: 5d1c71dcd36417356cabe2e340ca959d
size: 500879984
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.herzig.pkl
md5: 7e673c0cce8687903d67a529058bc0ae
size: 12608796
- path: metrics/bugginess/heuristics.bugginess/analysis_datasets.1151-commits.json
md5: c72120d3d7a8d250c07180af057a667c
size: 107877
- path: metrics/bugginess/heuristics.bugginess/analysis_datasets.berger.json
md5: b447290a7685292b52b053dbbd4f3782
size: 104758
- path: metrics/bugginess/heuristics.bugginess/analysis_datasets.bugginess-train.json
md5: b5dbf81969db76cef43b7783685067cd
size: 76922
- path: metrics/bugginess/heuristics.bugginess/analysis_datasets.herzig.json
md5: 4fc3ba6a0033cff0441c931cf9be685a
size: 109593
- path: metrics/bugginess/heuristics.bugginess/heuristic_metrics.json
md5: e9104e4042b0c9c716a7d0ac1aa16c69
size: 383
bugginess_combine_heuristics:
cmd: bohr apply-heuristics bugginess
deps:
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: cde4712cd3c7d97a01d472a96001655f
size: 2792588
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.berger.pkl
md5: e0369bc6d68aa85165b5a13925542d15
size: 917772
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.bugginess-train.pkl
md5: 5d1c71dcd36417356cabe2e340ca959d
size: 500879984
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.herzig.pkl
md5: 7e673c0cce8687903d67a529058bc0ae
size: 12608796
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/bugginess/analysis_datasets.1151-commits.csv
md5: 6b7c650110d6563e65fa473d1fddf74e
size: 23875
- path: generated/bugginess/analysis_datasets.berger.csv
md5: d1f3ec4548db935ec62e5a17f3dbf618
size: 21262
- path: generated/bugginess/analysis_datasets.bugginess-train.csv
md5: 99158b53a853fc5310072b015739eeb7
size: 29097
- path: generated/bugginess/analysis_datasets.herzig.csv
md5: fcee3c6b6438ea980997a72a9e7d0f2d
size: 25327
- path: generated/bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: 7842af0b57b43d1557796fe07a23cf13
size: 2792588
- path: generated/bugginess/heuristic_matrix_datasets.berger.pkl
md5: e9396acb35a49d225aadb0c22f1c64f9
size: 917772
- path: generated/bugginess/heuristic_matrix_datasets.bugginess-train.pkl
md5: d9141b7bf8b3eb25cf3e90490acbb812
size: 500879984
- path: generated/bugginess/heuristic_matrix_datasets.herzig.pkl
md5: ac1c03e92d33c156152e5c0fcd965423
size: 12608796
- path: metrics/bugginess/analysis_datasets.1151-commits.json
md5: c72120d3d7a8d250c07180af057a667c
size: 107877
- path: metrics/bugginess/analysis_datasets.berger.json
md5: b447290a7685292b52b053dbbd4f3782
size: 104758
- path: metrics/bugginess/analysis_datasets.bugginess-train.json
md5: b5dbf81969db76cef43b7783685067cd
size: 76922
- path: metrics/bugginess/analysis_datasets.herzig.json
md5: 4fc3ba6a0033cff0441c931cf9be685a
size: 109593
- path: metrics/bugginess/heuristic_metrics_datasets.1151-commits.json
md5: b96cb136399ae3adae98d63b9f2cfb27
size: 72
- path: metrics/bugginess/heuristic_metrics_datasets.berger.json
md5: 550545961be81184af6f7287900a4ac2
size: 73
- path: metrics/bugginess/heuristic_metrics_datasets.bugginess-train.json
md5: 9c903723760f0000193679b361437e41
size: 32
- path: metrics/bugginess/heuristic_metrics_datasets.herzig.json
md5: e622c8996ebf83f338511a8834be4529
size: 73
bugginess_label_dataset_datasets_herzig:
cmd: bohr label-dataset bugginess datasets.herzig
deps:
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
- path: datasets/herzig.py
md5: 18bd96fca060f555d99bd3a11b41bca9
size: 341
- path: generated/bugginess/heuristic_matrix_datasets.herzig.pkl
md5: ac1c03e92d33c156152e5c0fcd965423
size: 12608796
- path: generated/bugginess/label_model.pkl
md5: c43908471786ab37acf28b4430128d73
size: 1863238
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: labeled-datasets/datasets.herzig.labeled.csv
md5: c84027461f11241ec6294d136b5b9eed
size: 1539768
bugginess_label_dataset_datasets_1151-commits:
cmd: bohr label-dataset bugginess datasets.1151-commits
deps:
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: datasets/1151-commits.py
md5: a2bb6e9da60192fadaa7a9e724a8878d
size: 347
- path: generated/bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: 7842af0b57b43d1557796fe07a23cf13
size: 2792588
- path: generated/bugginess/label_model.pkl
md5: c43908471786ab37acf28b4430128d73
size: 1863238
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: labeled-datasets/datasets.1151-commits.labeled.csv
md5: 70250f3b3489aed05065c35a0b859c00
size: 359755
bugginess_label_dataset_datasets_berger:
cmd: bohr label-dataset bugginess datasets.berger
deps:
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: datasets/berger.py
md5: 3b08d66f821df196a060856de822c867
size: 341
- path: generated/bugginess/heuristic_matrix_datasets.berger.pkl
md5: e9396acb35a49d225aadb0c22f1c64f9
size: 917772
- path: generated/bugginess/label_model.pkl
md5: c43908471786ab37acf28b4430128d73
size: 1863238
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: labeled-datasets/datasets.berger.labeled.csv
md5: 1093d51fa04c97caa03f9e46a00f6bd5
size: 66784
bugginess_label_dataset_datasets_bugginess-train:
cmd: bohr label-dataset bugginess datasets.bugginess-train
deps:
- path: data/bugginess/train/bug_sample.csv
md5: 582037a749ed69771b87d7fc86ae04b8
size: 58465759
- path: data/bugginess/train/bug_sample_files.csv
md5: 7dc7360abeaff8685958a5ec1497990a
size: 2335330420
- path: data/bugginess/train/bug_sample_issues.csv
md5: 3aedc8183250c0d1f524a39ba2839140
size: 95930368
- path: datasets/bugginess-train.py
md5: e436471ca99cb8e8a253c94de22ce757
size: 489
- path: generated/bugginess/heuristic_matrix_datasets.bugginess-train.pkl
md5: d9141b7bf8b3eb25cf3e90490acbb812
size: 500879984
- path: generated/bugginess/label_model.pkl
md5: c43908471786ab37acf28b4430128d73
size: 1863238
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: labeled-datasets/datasets.bugginess-train.labeled.csv
md5: bfe4ac306c08f7188e094acc20e1ff03
size: 61623779
bugginess_apply_heuristics__heuristics_bugginess__datasets_1151-commits:
cmd: bohr apply-heuristics bugginess --heuristic-group heuristics.bugginess --dataset
datasets.1151-commits
deps:
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: datasets/1151-commits.py
md5: a2bb6e9da60192fadaa7a9e724a8878d
size: 347
- path: heuristics/bugginess.py
md5: 490e014b45c01afc68132c322cf2af78
size: 2897
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.1151-commits.pkl
md5: cde4712cd3c7d97a01d472a96001655f
size: 2792588
- path: metrics/bugginess/heuristics.bugginess/heuristic_metrics_datasets.1151-commits.json
md5: b96cb136399ae3adae98d63b9f2cfb27
size: 72
bugginess_apply_heuristics__heuristics_bugginess__datasets_berger:
cmd: bohr apply-heuristics bugginess --heuristic-group heuristics.bugginess --dataset
datasets.berger
deps:
- path: data/bugginess/test/berger.csv
md5: 71b9738db6cb47e3af599da316e3b570
size: 60847
- path: datasets/berger.py
md5: 3b08d66f821df196a060856de822c867
size: 341
- path: heuristics/bugginess.py
md5: 490e014b45c01afc68132c322cf2af78
size: 2897
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.berger.pkl
md5: e0369bc6d68aa85165b5a13925542d15
size: 917772
- path: metrics/bugginess/heuristics.bugginess/heuristic_metrics_datasets.berger.json
md5: 550545961be81184af6f7287900a4ac2
size: 73
bugginess_apply_heuristics__heuristics_bugginess__datasets_bugginess-train:
cmd: bohr apply-heuristics bugginess --heuristic-group heuristics.bugginess --dataset
datasets.bugginess-train
deps:
- path: data/bugginess/train/bug_sample.csv
md5: 582037a749ed69771b87d7fc86ae04b8
size: 58465759
- path: data/bugginess/train/bug_sample_files.csv
md5: 7dc7360abeaff8685958a5ec1497990a
size: 2335330420
- path: data/bugginess/train/bug_sample_issues.csv
md5: 3aedc8183250c0d1f524a39ba2839140
size: 95930368
- path: datasets/bugginess-train.py
md5: e436471ca99cb8e8a253c94de22ce757
size: 489
- path: heuristics/bugginess.py
md5: 490e014b45c01afc68132c322cf2af78
size: 2897
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.bugginess-train.pkl
md5: 5d1c71dcd36417356cabe2e340ca959d
size: 500879984
- path: metrics/bugginess/heuristics.bugginess/heuristic_metrics_datasets.bugginess-train.json
md5: 9c903723760f0000193679b361437e41
size: 32
bugginess_apply_heuristics__heuristics_bugginess__datasets_herzig:
cmd: bohr apply-heuristics bugginess --heuristic-group heuristics.bugginess --dataset
datasets.herzig
deps:
- path: data/bugginess/test/herzig.csv
md5: 279936268f488e1e613f81a537f29055
size: 1458311
- path: datasets/herzig.py
md5: 18bd96fca060f555d99bd3a11b41bca9
size: 341
- path: heuristics/bugginess.py
md5: 490e014b45c01afc68132c322cf2af78
size: 2897
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/bugginess/heuristics.bugginess/heuristic_matrix_datasets.herzig.pkl
md5: 7e673c0cce8687903d67a529058bc0ae
size: 12608796
- path: metrics/bugginess/heuristics.bugginess/heuristic_metrics_datasets.herzig.json
md5: e622c8996ebf83f338511a8834be4529
size: 73
smells_apply_heuristics__heuristics_smells__datasets_smells-test:
cmd: bohr apply-heuristics smells --heuristic-group heuristics.smells --dataset
datasets.smells-test
deps:
- path: data/smells/test.csv
md5: 0200db0eec17554a48a5b3a25719fd03
size: 77607
- path: datasets/smells-test.py
md5: daa3847137b86b014e68ceb421d9d61b
size: 290
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: heuristics/smells.py
md5: 3d03392a1e7d0b9bfaab0125dabfd5b6
size: 719
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/smells/heuristics.smells/heuristic_matrix_datasets.smells-test.pkl
md5: 143760b1cdf4c422a3430c583345337c
size: 4230
- path: metrics/smells/heuristics.smells/heuristic_metrics_datasets.smells-test.json
md5: 7fe3f867a78993a1e5e27178ba30b57b
size: 73
smells_apply_heuristics__heuristics_smells__datasets_smells-train:
cmd: bohr apply-heuristics smells --heuristic-group heuristics.smells --dataset
datasets.smells-train
deps:
- path: data/smells/train.csv
md5: 7fc9a7617e6f201523fba311317ba48f
size: 296407
- path: datasets/smells-train.py
md5: 5d0c1107da7c0fa3cf9278309d6a1e60
size: 292
- path: heuristics/keywords
md5: b4e7587c1b8e4e1461685a305d48bd66.dir
size: 1382
nfiles: 5
- path: heuristics/smells.py
md5: 3d03392a1e7d0b9bfaab0125dabfd5b6
size: 719
- path: labels.py
md5: 4ad220b4c289b2d8597bd6431c6565a6
size: 1707
params:
bohr.json:
bohr_framework_version: 0.3.4
outs:
- path: generated/smells/heuristics.smells/heuristic_matrix_datasets.smells-train.pkl
md5: 5e0fb0ce062af88c8d2b5360948bb3c9
size: 14312
- path: metrics/smells/heuristics.smells/heuristic_metrics_datasets.smells-train.json
md5: 3e6a9fc4c1202a8c31e3c1980abfbabe
size: 32
bugginess_transformer_label_1151-commits:
cmd: bash classifiers/bugginess-transformer/label.sh data/bugginess/test/1151-commits.csv
metrics/bugginess/transformer/1151-commits
deps:
- path: classifiers/bugginess-transformer/label.sh
md5: ce2646a4233e68991b57bbf2c7404ace
size: 320
- path: classifiers/bugginess-transformer/run.py
md5: faf5ebb8f0348b28aa1205e2c56cd41c
size: 12023
- path: data/bugginess/test/1151-commits.csv
md5: 7b32f404edf5982eb4c5f51b956663c4
size: 341651
- path: models/config.json
md5: 3effd3229ade2ed52eeb90d252790bf5
size: 716
- path: models/merges.txt
md5: fb9c1e34b6999f3a062df6ed4a604957
size: 458459
- path: models/pytorch_model.bin
md5: 40379a0207d19e2a24e116e941d7d675
size: 333858922
- path: models/special_tokens_map.json
md5: 17bb9e090d1d3a775683aba3ba610591
size: 239
- path: models/tokenizer_config.json
md5: e1a3e947aa301aadc524ee29f0dbcc39
size: 1257
- path: models/training_args.bin
md5: 408c3f12467908cabb77ded5ce3490ed
size: 2159
- path: models/vocab.json
md5: ca70df26ed267d27a9edde9c5341f17b
size: 813062
- path: requirements.txt
md5: 29b4c5d66c523cec0712dbcdcced42bb
size: 21
outs:
- path: metrics/bugginess/transformer/1151-commits/assigned_labels.csv
md5: 527025d5fa114a28fa55eed7f4c10801
size: 6964
bugginess_combine_labels_1151-commits:
cmd: python classifiers/bugginess-transformer/combine_labels.py labeled-datasets/datasets.1151-commits.labeled.csv
metrics/bugginess/transformer/1151-commits/assigned_labels.csv labeled-datasets/datasets.1151-commits.labeled.both.csv
deps:
- path: classifiers/bugginess-transformer/combine_labels.py
md5: fde465423b5c7ad410a7de6553dd1d2f
size: 706
- path: labeled-datasets/datasets.1151-commits.labeled.csv
md5: 70250f3b3489aed05065c35a0b859c00
size: 359755
- path: metrics/bugginess/transformer/1151-commits/assigned_labels.csv
md5: 527025d5fa114a28fa55eed7f4c10801
size: 6964
outs:
- path: labeled-datasets/datasets.1151-commits.labeled.both.csv
md5: f4d459e7b167fb0197dc49483eb2d2af
size: 366721
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