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University of British Columbia Sunflower Genome Dataset

Stream data with DDA:

from dagshub.streaming import DagsHubFilesystem

fs = DagsHubFilesystem(".", repo_url="https://dagshub.com/DagsHub-Datasets/ubc-sunflower-genome-dataset")

fs.listdir("s3://ubc-sunflower-genome")

Description:

This dataset captures Sunflower's genetic diversity originating from thousands of wild, cultivated, and landrace sunflower individuals distributed across North America.

The data consists of raw sequences and associated botanical metadata, aligned sequences (to three different reference genomes), and sets of SNPs computed across several cohorts.

Contact:

This dataset captures Sunflower's genetic diversity originating from thousands of wild, cultivated, and landrace sunflower individuals distributed across North America.

The data consists of raw sequences and associated botanical metadata, aligned sequences (to three different reference genomes), and sets of SNPs computed across several cohorts.

Update Frequency:

Twice per year.

Managed By:

The Rieseberg Lab at the University of British Columbia

Resources:

  1. resource:
    • Description: UBC Sunflower Genome Data 1
    • ARN: arn:aws:s3:::ubc-sunflower-genome
    • Region: us-west-2
    • Type: S3 Bucket

Tags:

aws-pds, agriculture, biodiversity, bioinformatics, biology, food security, genetic, genomic, life sciences, whole genome sequencing

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About

ubc-sunflower-genome-dataset is originate from the Registry of Open Data on AWS

Collaborators 5

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