Register
Login
Resources
Docs Blog Datasets Glossary Case Studies Tutorials & Webinars
Product
Data Engine LLMs Platform Enterprise
Pricing Explore
Connect to our Discord channel

dandiset.yaml 7.2 KB

You have to be logged in to leave a comment. Sign In
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
  1. '@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.9/context.json
  2. about: []
  3. access:
  4. - schemaKey: AccessRequirements
  5. status: dandi:OpenAccess
  6. assetsSummary:
  7. numberOfBytes: 0
  8. numberOfFiles: 0
  9. schemaKey: AssetsSummary
  10. citation: 'Kondo, Masashi; Sehara, Keisuke; Harukuni, Rie; Aoki, Ryo; Sugimoto, Shoya;
  11. Tanaka, Yasuhiro R; Matsuzaki, Masanori; Nakae, Ken (2025) BraiDyn-BC: mouse cued-lever-pull
  12. task dataset (Version draft) [Data set]. DANDI Archive. https://dandiarchive.org/dandiset/001425/draft'
  13. contributor:
  14. - affiliation:
  15. - identifier: https://ror.org/057zh3y96
  16. name: Department of Physiology, Graduate School of Medicine
  17. schemaKey: Affiliation
  18. email: m.kondo.neuro@gmail.com
  19. identifier: 0000-0001-8818-8316
  20. includeInCitation: true
  21. name: Kondo, Masashi
  22. roleName:
  23. - dcite:Conceptualization
  24. - dcite:FormalAnalysis
  25. - dcite:Investigation
  26. schemaKey: Person
  27. - affiliation:
  28. - identifier: https://ror.org/057zh3y96
  29. name: Department of Physiology, Graduate School of Medicine
  30. schemaKey: Affiliation
  31. email: seharak@m.u-tokyo.ac.jp
  32. identifier: 0000-0003-4368-8143
  33. includeInCitation: true
  34. name: Sehara, Keisuke
  35. roleName:
  36. - dcite:DataCurator
  37. - dcite:FormalAnalysis
  38. - dcite:Methodology
  39. schemaKey: Person
  40. - affiliation:
  41. - identifier: https://ror.org/057zh3y96
  42. name: Department of Physiology, Graduate School of Medicine
  43. schemaKey: Affiliation
  44. includeInCitation: true
  45. name: Harukuni, Rie
  46. roleName:
  47. - dcite:DataCollector
  48. schemaKey: Person
  49. - affiliation:
  50. - identifier: https://ror.org/05f8a4p63
  51. name: Brain Science Institute
  52. schemaKey: Affiliation
  53. includeInCitation: true
  54. name: Aoki, Ryo
  55. roleName:
  56. - dcite:FormalAnalysis
  57. - dcite:Methodology
  58. - dcite:Validation
  59. schemaKey: Person
  60. - affiliation:
  61. - identifier: https://ror.org/05f8a4p63
  62. name: Brain Science Institute
  63. schemaKey: Affiliation
  64. includeInCitation: true
  65. name: Sugimoto, Shoya
  66. roleName:
  67. - dcite:Methodology
  68. - dcite:Validation
  69. schemaKey: Person
  70. - affiliation:
  71. - identifier: https://ror.org/05f8a4p63
  72. name: Brain Science Institute
  73. schemaKey: Affiliation
  74. - identifier: https://ror.org/05f8a4p63
  75. name: Graduate School of Brain Sciences
  76. schemaKey: Affiliation
  77. identifier: 0009-0000-4779-4934
  78. includeInCitation: true
  79. name: Tanaka, Yasuhiro R
  80. roleName:
  81. - dcite:Supervision
  82. - dcite:FundingAcquisition
  83. schemaKey: Person
  84. - affiliation:
  85. - identifier: https://ror.org/057zh3y96
  86. name: Department of Physiology, Graduate School of Medicine
  87. schemaKey: Affiliation
  88. - identifier: https://ror.org/04j1n1c04
  89. name: Brain Functional Dynamics Collaboration Laboratory
  90. schemaKey: Affiliation
  91. - identifier: https://ror.org/057zh3y96
  92. name: Department of Biological Sciences, Graduate School of Science
  93. schemaKey: Affiliation
  94. - identifier: https://ror.org/057zh3y96
  95. name: International Research Center for Neurointelligence (WPI-IRCN)
  96. schemaKey: Affiliation
  97. email: mzakim@m.u-tokyo.ac.jp
  98. identifier: 0000-0003-3872-4322
  99. includeInCitation: true
  100. name: Matsuzaki, Masanori
  101. roleName:
  102. - dcite:Conceptualization
  103. - dcite:FundingAcquisition
  104. - dcite:Supervision
  105. schemaKey: Person
  106. - affiliation:
  107. - identifier: https://ror.org/055n47h92
  108. name: Exploratory Research Center on Life and Living Systems
  109. schemaKey: Affiliation
  110. - identifier: https://ror.org/00msqp585
  111. name: Department of Human and Artificial Intelligent Systems
  112. schemaKey: Affiliation
  113. email: ken.nakae@gmail.com
  114. identifier: 0000-0003-4183-1532
  115. includeInCitation: true
  116. name: Nakae, Ken
  117. roleName:
  118. - dcite:Conceptualization
  119. - dcite:FundingAcquisition
  120. - dcite:Supervision
  121. - dcite:ContactPerson
  122. schemaKey: Person
  123. - awardNumber: JP22H05163, JP22H05160, JP22H05154, JP22H05162, JP23K20309
  124. identifier: https://ror.org/00hhkn466
  125. name: JSPS KAKENHI
  126. roleName:
  127. - dcite:Funder
  128. schemaKey: Organization
  129. - awardNumber: JP19dm0207088, JP24wm0625404, JP24wm0625001, JP24wm0625113
  130. identifier: https://ror.org/004rtk039
  131. name: AMED
  132. roleName:
  133. - dcite:Funder
  134. schemaKey: Organization
  135. - awardNumber: JPMJMS2294
  136. identifier: https://ror.org/00097mb19
  137. name: JST
  138. roleName:
  139. - dcite:Funder
  140. schemaKey: Organization
  141. - awardNumber: Cooperative Study Program no. 19-102
  142. identifier: https://ror.org/005t7z309
  143. name: ExCELLS
  144. roleName:
  145. - dcite:Funder
  146. schemaKey: Organization
  147. dateCreated: '2025-04-28T01:23:44.851653+00:00'
  148. description: The BraiDyn-BC (Brain Dynamics underlying emergence of Behavioral Change)
  149. Database offers an extensive, multi-modal dataset that links wide-field calcium
  150. imaging of the mouse neocortex to comprehensive behavioral measurements during a
  151. behavioral task. As one of the contents in this database, we newly provide a dataset
  152. that includes 15 sessions spanning two weeks of motor skill learning, in which 25
  153. mice were trained to pull a lever to obtain water rewards. Simultaneous high-speed
  154. videography captures body, facial, and eye movements, and environmental parameters
  155. are monitored. The dataset also features resting-state cortical activity and sensory-evoked
  156. responses, enhancing its utility for both learning-related and sensory-driven neural
  157. dynamics studies.
  158. ethicsApproval: []
  159. id: DANDI:001425/draft
  160. identifier: DANDI:001425
  161. keywords:
  162. - wide-field calcium imaging
  163. - behavioral tracking
  164. - operant conditioning task
  165. - sensory mapping
  166. - high-speed videography
  167. - head fixation
  168. - pupil tracking
  169. - transcranial optical imaging
  170. license:
  171. - spdx:CC-BY-4.0
  172. manifestLocation:
  173. - https://api.dandiarchive.org/api/dandisets/001425/versions/draft/assets/
  174. name: 'BraiDyn-BC: mouse cued-lever-pull task dataset'
  175. protocol:
  176. - https://doi.org/10.1101/2025.02.03.631599
  177. relatedResource:
  178. - identifier: https://doi.org/10.1101/2025.02.03.631599
  179. name: A multimodal dataset linking wide-field calcium imaging to behavior changes
  180. in mice during an operant lever-pull task
  181. relation: dcite:IsDescribedBy
  182. repository: bioRxiv
  183. resourceType: dcite:Preprint
  184. schemaKey: Resource
  185. url: https://doi.org/10.1101/2025.02.03.631599
  186. - name: The BraiDyn-BC dataset for the cued-lever-pull task
  187. relation: dcite:IsVariantFormOf
  188. repository: Matsuzaki Lab Data Sharing Platform
  189. resourceType: dcite:Dataset
  190. schemaKey: Resource
  191. url: https://mmlab-repo.m.u-tokyo.ac.jp/r/Matsuzaki/BraiDyn-BC_CuedLeverPull
  192. - name: bdbc-data-pipeline
  193. relation: dcite:IsCompiledBy
  194. repository: GitHub
  195. resourceType: dcite:Software
  196. schemaKey: Resource
  197. url: https://github.com/BraiDyn-BC/bdbc-data-pipeline
  198. - name: Tutorials for navigating through BraiDyn-BC datasets (English)
  199. relation: dcite:IsDescribedBy
  200. repository: Google Drive
  201. resourceType: dcite:Software
  202. schemaKey: Resource
  203. url: https://drive.google.com/drive/folders/1QciTJd3tXkEGhz6782czB2dEO3fafm8M
  204. - identifier: https://github.com/BraiDyn-BC/bdbc-nwb-explorer
  205. name: bdbc-nwb-explorer
  206. relation: dcite:Compiles
  207. repository: bdbc-nwb-explorer
  208. resourceType: dcite:Software
  209. schemaKey: Resource
  210. url: https://github.com/BraiDyn-BC/bdbc-nwb-explorer
  211. repository: https://dandiarchive.org
  212. schemaKey: Dandiset
  213. schemaVersion: 0.6.9
  214. studyTarget:
  215. - Multi-timescale changes in neural and behavioral dynamics of mice across multiple
  216. task-training sessions
  217. url: https://dandiarchive.org/dandiset/001425/draft
  218. version: draft
  219. wasGeneratedBy: []
Tip!

Press p or to see the previous file or, n or to see the next file

Comments

Loading...