dandiarchive-dataset/s3://dandiarchive/dandisets/001425/0.250705.0947/dandiset.yaml

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access:
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  status: dandi:OpenAccess
assetsSummary:
  approach:
  - name: microscopy approach; cell population imaging
    schemaKey: ApproachType
  - name: behavioral approach
    schemaKey: ApproachType
  dataStandard:
  - identifier: RRID:SCR_015242
    name: Neurodata Without Borders (NWB)
    schemaKey: StandardsType
  measurementTechnique:
  - name: analytical technique
    schemaKey: MeasurementTechniqueType
  - name: surgical technique
    schemaKey: MeasurementTechniqueType
  - name: behavioral technique
    schemaKey: MeasurementTechniqueType
  - name: one-photon microscopy technique
    schemaKey: MeasurementTechniqueType
  numberOfBytes: 8064863266752
  numberOfFiles: 1838
  numberOfSubjects: 25
  schemaKey: AssetsSummary
  species:
  - identifier: http://purl.obolibrary.org/obo/NCBITaxon_10090
    name: Mus musculus - House mouse
    schemaKey: SpeciesType
  variableMeasured:
  - ProcessingModule
  - ImagingPlane
  - PupilTracking
  - SpatialSeries
  - OpticalChannel
  - PlaneSegmentation
  - EyeTracking
  - OnePhotonSeries
citation: 'Kondo, Masashi; Sehara, Keisuke; Harukuni, Rie; Aoki, Ryo; Sugimoto, Shoya;
  Tanaka, Yasuhiro R; Matsuzaki, Masanori; Nakae, Ken (2025) BraiDyn-BC: mouse cued-lever-pull
  task dataset (Version 0.250705.0947) [Data set]. DANDI Archive. https://dandiarchive.org/dandiset/001425/0.250705.0947'
contributor:
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  - identifier: https://ror.org/057zh3y96
    name: Department of Physiology, Graduate School of Medicine
    schemaKey: Affiliation
  email: m.kondo.neuro@gmail.com
  identifier: 0000-0001-8818-8316
  includeInCitation: true
  name: Kondo, Masashi
  roleName:
  - dcite:Conceptualization
  - dcite:FormalAnalysis
  - dcite:Investigation
  schemaKey: Person
- affiliation:
  - identifier: https://ror.org/057zh3y96
    name: Department of Physiology, Graduate School of Medicine
    schemaKey: Affiliation
  email: seharak@m.u-tokyo.ac.jp
  identifier: 0000-0003-4368-8143
  includeInCitation: true
  name: Sehara, Keisuke
  roleName:
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  - dcite:FormalAnalysis
  - dcite:Methodology
  schemaKey: Person
- affiliation:
  - identifier: https://ror.org/057zh3y96
    name: Department of Physiology, Graduate School of Medicine
    schemaKey: Affiliation
  includeInCitation: true
  name: Harukuni, Rie
  roleName:
  - dcite:DataCollector
  schemaKey: Person
- affiliation:
  - identifier: https://ror.org/05f8a4p63
    name: Brain Science Institute
    schemaKey: Affiliation
  includeInCitation: true
  name: Aoki, Ryo
  roleName:
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  - dcite:Methodology
  - dcite:Validation
  schemaKey: Person
- affiliation:
  - identifier: https://ror.org/05f8a4p63
    name: Brain Science Institute
    schemaKey: Affiliation
  includeInCitation: true
  name: Sugimoto, Shoya
  roleName:
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  - dcite:Validation
  schemaKey: Person
- affiliation:
  - identifier: https://ror.org/05f8a4p63
    name: Brain Science Institute
    schemaKey: Affiliation
  - identifier: https://ror.org/05f8a4p63
    name: Graduate School of Brain Sciences
    schemaKey: Affiliation
  identifier: 0009-0000-4779-4934
  includeInCitation: true
  name: Tanaka, Yasuhiro R
  roleName:
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  - dcite:FundingAcquisition
  schemaKey: Person
- affiliation:
  - identifier: https://ror.org/057zh3y96
    name: Department of Physiology, Graduate School of Medicine
    schemaKey: Affiliation
  - identifier: https://ror.org/04j1n1c04
    name: Brain Functional Dynamics Collaboration Laboratory
    schemaKey: Affiliation
  - identifier: https://ror.org/057zh3y96
    name: Department of Biological Sciences, Graduate School of Science
    schemaKey: Affiliation
  - identifier: https://ror.org/057zh3y96
    name: International Research Center for Neurointelligence (WPI-IRCN)
    schemaKey: Affiliation
  email: mzakim@m.u-tokyo.ac.jp
  identifier: 0000-0003-3872-4322
  includeInCitation: true
  name: Matsuzaki, Masanori
  roleName:
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  - dcite:Supervision
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- affiliation:
  - identifier: https://ror.org/055n47h92
    name: Exploratory Research Center on Life and Living Systems
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  - identifier: https://ror.org/00msqp585
    name: Department of Human and Artificial Intelligent Systems
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  email: ken.nakae@gmail.com
  identifier: 0000-0003-4183-1532
  includeInCitation: true
  name: Nakae, Ken
  roleName:
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  schemaKey: Person
- awardNumber: JP22H05163, JP22H05160, JP22H05154, JP22H05162, JP23K20309
  identifier: https://ror.org/00hhkn466
  name: JSPS KAKENHI
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: JP19dm0207088, JP24wm0625404, JP24wm0625001, JP24wm0625113
  identifier: https://ror.org/004rtk039
  name: AMED
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- awardNumber: JPMJMS2294
  identifier: https://ror.org/00097mb19
  name: JST
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: Cooperative Study Program no. 19-102
  identifier: https://ror.org/005t7z309
  name: ExCELLS
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dateCreated: '2025-04-28T01:23:44.851653+00:00'
datePublished: '2025-07-05T09:47:54.642381+00:00'
description: The BraiDyn-BC (Brain Dynamics underlying emergence of Behavioral Change)
  Database offers an extensive, multi-modal dataset that links wide-field calcium
  imaging of the mouse neocortex to comprehensive behavioral measurements during a
  behavioral task. As one of the contents in this database, we newly provide a dataset
  that includes 15 sessions spanning two weeks of motor skill learning, in which 25
  mice were trained to pull a lever to obtain water rewards. Simultaneous high-speed
  videography captures body, facial, and eye movements, and environmental parameters
  are monitored. The dataset also features resting-state cortical activity and sensory-evoked
  responses, enhancing its utility for both learning-related and sensory-driven neural
  dynamics studies.
ethicsApproval: []
id: DANDI:001425/0.250705.0947
identifier: DANDI:001425
keywords:
- wide-field calcium imaging
- behavioral tracking
- operant conditioning task
- sensory mapping
- high-speed videography
- head fixation
- pupil tracking
- transcranial optical imaging
license:
- spdx:CC-BY-4.0
manifestLocation:
- https://dandiarchive.s3.amazonaws.com/dandisets/001425/0.250705.0947/assets.yaml
name: 'BraiDyn-BC: mouse cued-lever-pull task dataset'
protocol:
- https://doi.org/10.1101/2025.02.03.631599
publishedBy:
  endDate: '2025-07-05T09:47:54.642381+00:00'
  id: urn:uuid:a1c7eda7-729a-4ca0-86ed-d5a925d5d0e2
  name: DANDI publish
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  startDate: '2025-07-05T09:47:54.642381+00:00'
  wasAssociatedWith:
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    identifier: RRID:SCR_017571
    name: DANDI API
    schemaKey: Software
    version: 0.1.0
relatedResource:
- identifier: https://doi.org/10.1101/2025.02.03.631599
  name: A multimodal dataset linking wide-field calcium imaging to behavior changes
    in mice during an operant lever-pull task
  relation: dcite:IsDescribedBy
  repository: bioRxiv
  resourceType: dcite:Preprint
  schemaKey: Resource
  url: https://doi.org/10.1101/2025.02.03.631599
- name: The BraiDyn-BC dataset for the cued-lever-pull task
  relation: dcite:IsVariantFormOf
  repository: Matsuzaki Lab Data Sharing Platform
  resourceType: dcite:Dataset
  schemaKey: Resource
  url: https://mmlab-repo.m.u-tokyo.ac.jp/r/Matsuzaki/BraiDyn-BC_CuedLeverPull
- name: bdbc-data-pipeline
  relation: dcite:IsCompiledBy
  repository: GitHub
  resourceType: dcite:Software
  schemaKey: Resource
  url: https://github.com/BraiDyn-BC/bdbc-data-pipeline
- name: Tutorials for navigating through BraiDyn-BC datasets (English)
  relation: dcite:IsDescribedBy
  repository: Google Drive
  resourceType: dcite:Software
  schemaKey: Resource
  url: https://drive.google.com/drive/folders/1QciTJd3tXkEGhz6782czB2dEO3fafm8M
- identifier: https://github.com/BraiDyn-BC/bdbc-nwb-explorer
  name: bdbc-nwb-explorer
  relation: dcite:Compiles
  repository: bdbc-nwb-explorer
  resourceType: dcite:Software
  schemaKey: Resource
  url: https://github.com/BraiDyn-BC/bdbc-nwb-explorer
repository: https://dandiarchive.org
schemaKey: Dandiset
schemaVersion: 0.6.9
studyTarget:
- Multi-timescale changes in neural and behavioral dynamics of mice across multiple
  task-training sessions
url: https://dandiarchive.org/dandiset/001425/0.250705.0947
version: 0.250705.0947
wasGeneratedBy: []