DagsHub-Datasets
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dandiarchive-dataset


  
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            {"id":"DANDI:001362/draft","url":"https://dandiarchive.org/dandiset/001362/draft","name":"CATNIP Analysis of light sheet imaging of whole-brain c-Fos immunostaining in constitutive PACAP-knockout and control PACAP-flox/flox mice","about":[],"access":[{"status":"dandi:OpenAccess","schemaKey":"AccessRequirements"}],"license":["spdx:CC0-1.0"],"version":"draft","@context":"https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.9/context.json","citation":"Lawrimore, Joshua; Eiden, Lee; Usdin, Ted (2025) CATNIP Analysis of light sheet imaging of whole-brain c-Fos immunostaining in constitutive PACAP-knockout and control PACAP-flox/flox mice (Version draft) [Data set]. DANDI Archive. https://dandiarchive.org/dandiset/001362/draft","keywords":["light sheet","microscopy","iDISCO","fluorescence","c-Fos","Immunostaining","PACAP","Mouse","Mice"],"protocol":[],"schemaKey":"Dandiset","identifier":"DANDI:001362","repository":"https://dandiarchive.org","contributor":[{"name":"Lawrimore, Joshua","email":"josh.lawrimore@gmail.com","roleName":["dcite:ContactPerson"],"schemaKey":"Person","identifier":"0000-0003-2301-9073","affiliation":[],"includeInCitation":true},{"name":"Eiden, Lee","roleName":["dcite:Author","dcite:FundingAcquisition","dcite:Resources","dcite:Supervision"],"schemaKey":"Person","identifier":"0000-0001-7524-944X","awardNumber":"1ZIAMH002386","includeInCitation":true},{"name":"Usdin, Ted","roleName":["dcite:FundingAcquisition","dcite:Investigation","dcite:Methodology","dcite:Resources","dcite:Software"],"schemaKey":"Person","awardNumber":"1ZICMH002963","includeInCitation":true},{"name":"National Institute of Mental Health","schemaKey":"Organization","identifier":"https://ror.org/04xeg9z08","awardNumber":"ZICMH002963","includeInCitation":false},{"name":"National Institute of Mental Health","schemaKey":"Organization","identifier":"https://ror.org/04xeg9z08","awardNumber":"ZIAMH002386","includeInCitation":false}],"dateCreated":"2025-03-13T13:09:33.535535+00:00","description":"This derivative dataset was compiled from data from a study conducted by the National Institute of Mental Health's Intramural Research Program from images acquired from the Systems Neuroscience Imaging Resource and reformatted into BIDS by the NIMH Data Science and Sharing Team. The derivative dataset contains Richardson-Lucy deconvloved and N4 intensity inhomogeneity corrected 3D image stacks and the analysis derivatives of the corrected image stacks from the CATNAP analysis pipeline, https://github.com/snehashis-roy/CATNIP. Data is from the publication \"Constitutive and conditional deletion reveals distinct phenotypes driven by developmental versus neurotransmitter actions of the neuropeptide PACAP,\" https://doi.org/10.1111/jne.13286.","studyTarget":[],"assetsSummary":{"schemaKey":"AssetsSummary","numberOfBytes":0,"numberOfFiles":0},"schemaVersion":"0.6.9","ethicsApproval":[],"wasGeneratedBy":[],"relatedResource":[],"manifestLocation":["https://api.dandiarchive.org/api/dandisets/001362/versions/draft/assets/"]}