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dandiset.yaml 3.5 KB

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  1. '@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.9/context.json
  2. access:
  3. - schemaKey: AccessRequirements
  4. status: dandi:OpenAccess
  5. assetsSummary:
  6. approach:
  7. - name: electrophysiological approach
  8. schemaKey: ApproachType
  9. dataStandard:
  10. - identifier: RRID:SCR_015242
  11. name: Neurodata Without Borders (NWB)
  12. schemaKey: StandardsType
  13. measurementTechnique:
  14. - name: analytical technique
  15. schemaKey: MeasurementTechniqueType
  16. - name: signal filtering technique
  17. schemaKey: MeasurementTechniqueType
  18. - name: surgical technique
  19. schemaKey: MeasurementTechniqueType
  20. - name: multi electrode extracellular electrophysiology recording technique
  21. schemaKey: MeasurementTechniqueType
  22. numberOfBytes: 692579472
  23. numberOfFiles: 1279
  24. numberOfSubjects: 5
  25. schemaKey: AssetsSummary
  26. species:
  27. - identifier: http://purl.obolibrary.org/obo/NCBITaxon_9606
  28. name: Homo sapiens - Human
  29. schemaKey: SpeciesType
  30. variableMeasured:
  31. - ElectricalSeries
  32. - LFP
  33. - ElectrodeGroup
  34. - ProcessingModule
  35. citation: Biswas, Ananna (2025) Parkinson's Electrophysiological Signal Dataset (PESD)
  36. (Version draft) [Data set]. DANDI Archive. https://dandiarchive.org/dandiset/001333/draft
  37. contributor:
  38. - affiliation: []
  39. email: ananna314.bd@gmail.com
  40. includeInCitation: true
  41. name: Biswas, Ananna
  42. roleName:
  43. - dcite:ContactPerson
  44. schemaKey: Person
  45. dateCreated: '2025-02-08T10:15:43.847350+00:00'
  46. datePublished: '2025-03-27T22:20:53.652589+00:00'
  47. description: 'The dataset contains electrophysiological signals from both healthy
  48. and parkinsonian subjects. We generated two types of samples from each group. The
  49. parkinsonian signals show a relatively high power density at the beta frequency
  50. (13 to 30 Hz). Thus, the beta oscillations (13 to 30 Hz) in the subthalamic nucleus
  51. (STN) are typically used as the pathological biomarkers for PD symptoms. Each sample
  52. includes two types of signals: Beta Average Rectified Voltage (ARV) and Local Field
  53. Potential (LFP) from the Subthalamic Nucleus (STN). The ARV signals are in the frequency
  54. domain and LFP signals are in the time domain.
  55. Beta ARV Signal: The controller beta values are determined by calculating the Average
  56. Rectified Value (ARV) of the beta band. This is achieved by fully rectifying the
  57. filtered LFP signal using a fourth-order Chebyshev band-pass filter with an 8 Hz
  58. bandwidth, centered around the peak of the LFP power spectrum. Local Field Potential
  59. (LFP) - STN: Local Field Potentials are derived from the synchronized activity of
  60. neuron populations between the cortex, STN, and thalamus.
  61. More details can be found in our article named, “Preliminary Results of Neuromorphic
  62. Controller Design and a Parkinson''s Disease Dataset Building for Closed-Loop Deep
  63. Brain Stimulation”, available at https://arxiv.org/abs/2407.17756'
  64. id: DANDI:001333/draft
  65. identifier: DANDI:001333
  66. license:
  67. - spdx:CC-BY-4.0
  68. manifestLocation:
  69. - https://api.dandiarchive.org/api/dandisets/001333/versions/draft/assets/
  70. name: Parkinson's Electrophysiological Signal Dataset (PESD)
  71. publishedBy:
  72. endDate: '2025-03-27T22:20:53.652589+00:00'
  73. id: urn:uuid:ae476dfe-913c-4cfe-932b-8f1f99342dff
  74. name: DANDI publish
  75. schemaKey: PublishActivity
  76. startDate: '2025-03-27T22:20:53.652589+00:00'
  77. wasAssociatedWith:
  78. - id: urn:uuid:c92d6c4d-4458-424e-bbd3-3e84585e3190
  79. identifier: RRID:SCR_017571
  80. name: DANDI API
  81. schemaKey: Software
  82. version: 0.1.0
  83. repository: https://dandiarchive.org
  84. schemaKey: Dandiset
  85. schemaVersion: 0.6.9
  86. url: https://dandiarchive.org/dandiset/001333/draft
  87. version: draft
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