dandiarchive-dataset/s3://dandiarchive/dandisets/001084/draft/dandiset.yaml

'@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.7/context.json
about:
- identifier: http://purl.obolibrary.org/obo/UBERON_0002435
  name: striatum
  schemaKey: Anatomy
- identifier: http://purl.obolibrary.org/obo/CHEBI_18243
  name: dopamine
  schemaKey: Anatomy
access:
- schemaKey: AccessRequirements
  status: dandi:OpenAccess
assetsSummary:
  numberOfBytes: 0
  numberOfFiles: 0
  schemaKey: AssetsSummary
citation: Vu, Mai-Anh T.; Brown, Eleanor H.; Wen, Michelle J.; Noggle, Christian A.;
  Zhang, Zicheng; Monk, Kevin J.; Bouabid, Safa; Mroz, Lydia; Graham, Benjamin M.;
  Zhuo, Yizhou; Li, Yulong; Otchy, Timothy M.; Tian, Lin; Davison, Ian G.; Boas, David
  A.; Howe, Mark W. (2024) Targeted micro-fiber arrays for measuring and manipulating
  localized multi-scale neural dynamics over large, deep brain volumes during behavior
  (Version draft) [Data set]. DANDI archive. https://dandiarchive.org/dandiset/001084/draft
contributor:
- affiliation: []
  email: maianhvu@bu.edu
  identifier: 0000-0003-4766-1159
  includeInCitation: true
  name: Vu, Mai-Anh T.
  roleName:
  - dcite:Author
  - dcite:ContactPerson
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Brown, Eleanor H.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Wen, Michelle J.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Noggle, Christian A.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Zhang, Zicheng
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Monk, Kevin J.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Bouabid, Safa
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Mroz, Lydia
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Graham, Benjamin M.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Zhuo, Yizhou
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Li, Yulong
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Otchy, Timothy M.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Tian, Lin
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Davison, Ian G.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  includeInCitation: true
  name: Boas, David A.
  roleName:
  - dcite:Author
  schemaKey: Person
- affiliation: []
  email: mwhowe@bu.edu
  identifier: 0000-0002-6865-5084
  includeInCitation: true
  name: Howe, Mark W.
  roleName:
  - dcite:Author
  - dcite:ContactPerson
  schemaKey: Person
- awardNumber: ASAP-020370
  identifier: https://ror.org/03arq3225
  includeInCitation: false
  name: Michael J. Fox Foundation
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: R01 MH125835
  identifier: https://ror.org/04xeg9z08
  includeInCitation: false
  name: National Institute of Mental Health
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: PF-SF-JFA-836662
  identifier: https://ror.org/05mx85j86
  includeInCitation: false
  name: Parkinson’s Foundation
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: F32MH120894
  identifier: https://ror.org/04xeg9z08
  includeInCitation: false
  name: National Institute of Mental Health
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: 1F31NS127536
  identifier: https://ror.org/04xeg9z08
  includeInCitation: false
  name: National Institute of Mental Health
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: ' F32DC020665'
  identifier: https://ror.org/04mhx6838
  includeInCitation: false
  name: National Institute on Deafness and Other Communication Disorders
  roleName:
  - dcite:Funder
  schemaKey: Organization
- awardNumber: ' RF1NS128975'
  identifier: https://ror.org/01s5ya894
  includeInCitation: false
  name: National Institute of Neurological Disorders and Stroke​
  roleName:
  - dcite:Funder
  schemaKey: Organization
dateCreated: '2024-07-09T09:02:04.023305+00:00'
description: Neural population dynamics relevant to behavior vary over multiple spatial
  and temporal scales across three-dimensional volumes. Current optical approaches
  lack the spatial coverage and resolution necessary to measure and manipulate naturally
  occurring patterns of large-scale, distributed dynamics within and across deep brain
  regions such as the striatum. We designed a new micro-fiber array approach capable
  of chronically measuring and optogenetically manipulating local dynamics across
  over 100 targeted locations simultaneously in head-fixed and freely moving mice,
  enabling the investigation of cell-type- and neurotransmitter-specific signals over
  arbitrary 3D volumes at a spatial resolution and coverage previously inaccessible.
  We applied this method to resolve rapid dopamine release dynamics across the striatum,
  revealing distinct, modality-specific spatiotemporal patterns in response to salient
  sensory stimuli extending over millimeters of tissue.
ethicsApproval: []
id: DANDI:001084/draft
identifier: DANDI:001084
keywords:
- multi-site photometry
- behaving mice
- freely moving mice
- striatum
- dopamine
- neuromodulation
license:
- spdx:CC-BY-4.0
manifestLocation:
- https://api.dandiarchive.org/api/dandisets/001084/versions/draft/assets/
name: Targeted micro-fiber arrays for measuring and manipulating localized multi-scale
  neural dynamics over large, deep brain volumes during behavior
protocol:
- https://doi.org/10.17504/protocols.io.bp2l6xyrklqe/v1
relatedResource:
- identifier: https://doi.org/10.1016/j.neuron.2023.12.011
  name: Targeted micro-fiber arrays for measuring and manipulating localized multi-scale
    neural dynamics over large, deep brain volumes during behavior
  relation: dcite:IsDescribedBy
  repository: Neuron
  resourceType: dcite:JournalArticle
  schemaKey: Resource
  url: https://doi.org/https://doi.org/10.1016/j.neuron.2023.12.011
- name: howe-lab-to-nwb
  relation: dcite:IsCompiledBy
  repository: GitHub
  resourceType: dcite:Software
  schemaKey: Resource
  url: https://github.com/catalystneuro/howe-lab-to-nwb/
- name: NWB tutorial notebook
  relation: dcite:IsDescribedBy
  repository: GitHub
  resourceType: dcite:ComputationalNotebook
  schemaKey: Resource
  url: https://github.com/dandi/example-notebooks/blob/master/001084/HoweLab/001084_demo.ipynb
- name: Howe Lab GitHub
  relation: dcite:IsSupplementedBy
  repository: GitHub
  resourceType: dcite:Software
  schemaKey: Resource
  url: https://github.com/howelab
repository: https://dandiarchive.org
schemaKey: Dandiset
schemaVersion: 0.6.7
studyTarget: []
url: https://dandiarchive.org/dandiset/001084/draft
version: draft
wasGeneratedBy: []