Register
Login
Resources
Docs Blog Datasets Glossary Case Studies Tutorials & Webinars
Product
Data Engine LLMs Platform Enterprise
Pricing Explore
Connect to our Discord channel

dandiset.yaml 7.2 KB

You have to be logged in to leave a comment. Sign In
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
  1. '@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.4/context.json
  2. about:
  3. - name: Medial Temporal Lobe
  4. schemaKey: GenericType
  5. - name: Medial Frontal Cortex
  6. schemaKey: Anatomy
  7. access:
  8. - schemaKey: AccessRequirements
  9. status: dandi:OpenAccess
  10. assetsSummary:
  11. numberOfBytes: 0
  12. numberOfFiles: 0
  13. schemaKey: AssetsSummary
  14. citation: Kyzar, Michael; Kaminski, Jan; Brzezicka, Aneta; Reed, Chrystal M.; Chung,
  15. Jeffrey M. ; Mamelak, Adam M.; Rutishauser, Ueli (2024) Dataset of human-single
  16. neuron activity during a Sternberg working memory task (Version draft) [Data set].
  17. DANDI archive. https://dandiarchive.org/dandiset/000469/draft
  18. contributor:
  19. - affiliation:
  20. - name: Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA,
  21. USA
  22. schemaKey: Affiliation
  23. email: kyzarnexus@gmail.com
  24. identifier: 0009-0004-4392-9933
  25. includeInCitation: true
  26. name: Kyzar, Michael
  27. roleName:
  28. - dcite:ContactPerson
  29. - dcite:Author
  30. - dcite:DataCurator
  31. - dcite:DataManager
  32. - dcite:FormalAnalysis
  33. - dcite:Investigation
  34. - dcite:Maintainer
  35. - dcite:Methodology
  36. - dcite:ProjectLeader
  37. - dcite:ProjectManager
  38. - dcite:ProjectMember
  39. - dcite:Researcher
  40. - dcite:Software
  41. - dcite:Validation
  42. - dcite:Visualization
  43. schemaKey: Person
  44. - affiliation: []
  45. identifier: 0000-0002-8663-7314
  46. includeInCitation: true
  47. name: Kaminski, Jan
  48. roleName: []
  49. schemaKey: Person
  50. - affiliation: []
  51. identifier: 0000-0003-1950-4180
  52. includeInCitation: true
  53. name: Brzezicka, Aneta
  54. roleName:
  55. - dcite:Author
  56. - dcite:DataCollector
  57. schemaKey: Person
  58. - affiliation: []
  59. identifier: 0000-0002-7157-3645
  60. includeInCitation: true
  61. name: Reed, Chrystal M.
  62. roleName: []
  63. schemaKey: Person
  64. - affiliation: []
  65. identifier: 0000-0002-4989-0994
  66. includeInCitation: true
  67. name: 'Chung, Jeffrey M. '
  68. roleName: []
  69. schemaKey: Person
  70. - affiliation: []
  71. identifier: 0000-0002-4245-6431
  72. includeInCitation: true
  73. name: Mamelak, Adam M.
  74. roleName: []
  75. schemaKey: Person
  76. - affiliation:
  77. - name: Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA,
  78. USA
  79. schemaKey: Affiliation
  80. - name: Department of Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA
  81. schemaKey: Affiliation
  82. - name: Division of Biology and Biological Engineering, California Institute of
  83. Technology, Pasadena, CA, USA
  84. schemaKey: Affiliation
  85. - name: Computational and Neural Systems Program, California Institute of Technology,
  86. Pasadena, CA, USA
  87. schemaKey: Affiliation
  88. - name: Center for Neural Science and Medicine, Department of Biomedical Science,
  89. Cedars-Sinai Medical Center, Los Angeles, CA, USA
  90. schemaKey: Affiliation
  91. awardNumber: ''
  92. email: Ueli.Rutishauser@cshs.org
  93. identifier: 0000-0002-9207-7069
  94. includeInCitation: true
  95. name: Rutishauser, Ueli
  96. roleName:
  97. - dcite:Author
  98. - dcite:Conceptualization
  99. - dcite:ProjectMember
  100. - dcite:FundingAcquisition
  101. - dcite:Resources
  102. - dcite:Software
  103. - dcite:Supervision
  104. - dcite:Validation
  105. - dcite:ContactPerson
  106. schemaKey: Person
  107. - awardNumber: R01MH110831
  108. contactPoint: []
  109. includeInCitation: false
  110. name: National Institute of Mental Health
  111. roleName:
  112. - dcite:Sponsor
  113. schemaKey: Organization
  114. - affiliation: []
  115. identifier: 0000-0002-1137-8987
  116. includeInCitation: false
  117. name: Sullivan, Shannon
  118. roleName:
  119. - dcite:DataCollector
  120. - dcite:Validation
  121. schemaKey: Person
  122. - awardNumber: U01NS117839, U01NS098961
  123. contactPoint: []
  124. includeInCitation: false
  125. name: National Insitute of Neurological Disorders and Stroke
  126. roleName:
  127. - dcite:Sponsor
  128. schemaKey: Organization
  129. dateCreated: '2023-03-30T17:37:36.429935+00:00'
  130. description: "We present a dataset of 1809 single neurons recorded from the human
  131. medial temporal lobe (amygdala and hippocampus) and medial frontal lobe (anterior
  132. cingulate cortex, pre-supplementary motor area, ventral medial prefrontal cortex)
  133. across 41 sessions from 21 patients that underwent intracranial monitoring for epileptic
  134. activity. Subjects first performed a screening task (907 neurons), based on which
  135. we identified images for which highly selective cells were present in the medial
  136. temporal lobe. Subjects then performed a working memory task (902 neurons), in which
  137. they were sequentially presented with 1-3 images, and following a maintenance period,
  138. were asked if a probe was identical to one of the currently maintained images. This
  139. Neural data without borders (NWB) formatted dataset includes spike times, extracellular
  140. spike waveforms, stimuli presented, behavior, electrode locations, and subject demographics.
  141. As validation, we replicate previous findings on the existence of concept cells
  142. and their persistent activity during working memory maintenance. This dataset provides
  143. a substantial amount of rare human single neuron recordings together with behavior,
  144. thereby enabling investigation of the neural mechanisms of working memory at the
  145. single-neuron level.\n\nThis code accompanies the following data descriptor:\n*
  146. Kyzar M, Kamiński J, Brzezicka A, Reed CM, Chung JM, Mamelak AN, Rutishauser U.
  147. Dataset of human-single neuron activity during a Sternberg working memory task.
  148. Sci Data. 2024 Jan 18;11(1):89. doi: 10.1038/s41597-024-02943-8. PMID: 38238342;
  149. PMCID: PMC10796636.\n [Link to Paper](https://pubmed.ncbi.nlm.nih.gov/38238342/)\n*
  150. Sample code to access and analyze this dataset has been provided: https://github.com/rutishauserlab/workingmem-release-NWB\n"
  151. ethicsApproval: []
  152. id: DANDI:000469/draft
  153. identifier: DANDI:000469
  154. keywords:
  155. - cognitive neuroscience
  156. - data standardization
  157. - working memory
  158. - neurophysiology
  159. - neurosurgery
  160. - NWB
  161. - open source
  162. - single-neurons
  163. license:
  164. - spdx:CC-BY-4.0
  165. manifestLocation:
  166. - https://api.dandiarchive.org/api/dandisets/000469/versions/draft/assets/
  167. name: Dataset of human-single neuron activity during a Sternberg working memory task.
  168. protocol: []
  169. relatedResource:
  170. - identifier: doi.org/10.1038/s41597-024-02943-8
  171. name: Dataset of human-single neuron activity during a Sternberg working memory
  172. task
  173. relation: dcite:IsSupplementTo
  174. repository: Scientific Data
  175. schemaKey: Resource
  176. url: https://www.nature.com/articles/s41597-024-02943-8
  177. - identifier: https://doi.org/10.5281/zenodo.8161627
  178. name: 'Source code for: Dataset of human-single neuron activity during a Sternberg
  179. working memory task'
  180. relation: dcite:IsSupplementedBy
  181. repository: workingmem-release-NWB
  182. schemaKey: Resource
  183. url: https://github.com/rutishauserlab/workingmem-release-NWB
  184. - identifier: 10.1038/nn.4509
  185. name: Persistently active neurons in human medial frontal and medial temporal lobe
  186. support working memory
  187. relation: dcite:IsDerivedFrom
  188. repository: Nature Neuroscience
  189. schemaKey: Resource
  190. url: https://www.nature.com/articles/nn.4509
  191. - identifier: 10.1016/j.neuron.2020.01.032
  192. name: Combined Phase-Rate Coding by Persistently Active Neurons as a Mechanism for
  193. Maintaining Multiple Items in Working Memory in Humans
  194. relation: dcite:IsDerivedFrom
  195. repository: Neuron
  196. schemaKey: Resource
  197. url: https://www.sciencedirect.com/science/article/pii/S0896627320300581?via%3Dihub
  198. repository: https://dandiarchive.org
  199. schemaKey: Dandiset
  200. schemaVersion: 0.6.4
  201. studyTarget: []
  202. url: https://dandiarchive.org/dandiset/000469/draft
  203. version: draft
  204. wasGeneratedBy: []
Tip!

Press p or to see the previous file or, n or to see the next file

Comments

Loading...