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- {"id":"DANDI:001442/0.250512.1626","url":"https://dandiarchive.org/dandiset/001442/0.250512.1626","name":"SEM Images of Rat Spinal Cord with Axon and Myelin Segmentations","about":[],"access":[{"status":"dandi:OpenAccess","schemaKey":"AccessRequirements"}],"license":["spdx:CC-BY-4.0"],"version":"0.250512.1626","@context":"https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.9/context.json","citation":"Saliani, Ariane; Duval, Tanguy; Nami, Harris; Husein, Nafisa; Collin, Armand; Zaimi, Aldo; Bourget, Marie-Hélène; Foias, Alexandru; Boudreau, Mathieu; Cohen-Adad, Julien (2025) SEM Images of Rat Spinal Cord with Axon and Myelin Segmentations (Version 0.250512.1626) [Data set]. DANDI Archive. https://dandiarchive.org/dandiset/001442/0.250512.1626","schemaKey":"Dandiset","identifier":"DANDI:001442","repository":"https://dandiarchive.org","contributor":[{"name":"Saliani, Ariane","roleName":["dcite:DataCollector","dcite:Author"],"schemaKey":"Person","identifier":"0000-0002-5369-3264","includeInCitation":true},{"name":"Duval, Tanguy","roleName":["dcite:Author","dcite:DataCollector"],"schemaKey":"Person","identifier":"0000-0002-1228-5192","includeInCitation":true},{"name":"Nami, Harris","roleName":["dcite:Author","dcite:DataCurator"],"schemaKey":"Person","includeInCitation":true},{"name":"Husein, Nafisa","roleName":["dcite:DataCurator","dcite:Author"],"schemaKey":"Person","includeInCitation":true},{"name":"Collin, Armand","email":"armand.collin@polymtl.ca","roleName":["dcite:DataCurator","dcite:Author","dcite:Maintainer"],"schemaKey":"Person","identifier":"0009-0005-3258-122X","affiliation":[],"includeInCitation":true},{"name":"Zaimi, Aldo","roleName":["dcite:Author","dcite:DataCurator"],"schemaKey":"Person","includeInCitation":true},{"name":"Bourget, Marie-Hélène","roleName":["dcite:DataCurator","dcite:Author","dcite:Maintainer"],"schemaKey":"Person","includeInCitation":true},{"name":"Foias, Alexandru","roleName":["dcite:DataCurator"],"schemaKey":"Person","includeInCitation":true},{"name":"Boudreau, Mathieu","roleName":["dcite:DataCurator"],"schemaKey":"Person","identifier":"0000-0002-7726-4456","includeInCitation":true},{"name":"Cohen-Adad, Julien","email":"jcohen@polymtl.ca","roleName":["dcite:Author","dcite:DataManager","dcite:Supervision","dcite:ContactPerson"],"schemaKey":"Person","identifier":"0000-0003-3662-9532","includeInCitation":true},{"name":"Antonsanti, Pierre-Louis","roleName":["dcite:Software"],"schemaKey":"Person"},{"name":"Herman, Victor","roleName":["dcite:Software"],"schemaKey":"Person"},{"name":"Perone, Christian","roleName":["dcite:Software"],"schemaKey":"Person"},{"name":"Wabartha, Maxime","roleName":["dcite:Software"],"schemaKey":"Person"}],"dateCreated":"2025-05-09T18:20:39.844171+00:00","description":"SEM dataset for AxonDeepSeg (https://axondeepseg.readthedocs.io/)\n\n- 10 rat spinal cord samples (cervical level) with axon and myelin manual segmentation labels. \n\n- Isotropic pixel size resolution ranging from 0.05 to 0.18 um\n\n- Every touching fiber is separated by a 1 pixel delineation in the masks.\n\n- This dataset comprises acquisitions conducted by various researchers between 2015 and 2017. The images represent small cropped sections extracted from larger mosaic images.\n\nExample dataset containing scanning electron microscopy (SEM) data to illustrate BIDS convention.\n","publishedBy":{"id":"urn:uuid:b3a32731-092d-4676-878d-10a480132e97","name":"DANDI publish","endDate":"2025-05-12T16:26:19.527099+00:00","schemaKey":"PublishActivity","startDate":"2025-05-12T16:26:19.527099+00:00","wasAssociatedWith":[{"id":"urn:uuid:547591db-913e-4a25-bad8-8a770d505c08","name":"DANDI API","version":"0.1.0","schemaKey":"Software","identifier":"RRID:SCR_017571"}]},"assetsSummary":{"species":[],"approach":[],"schemaKey":"AssetsSummary","dataStandard":[{"name":"Brain Imaging Data Structure (BIDS)","schemaKey":"StandardsType","identifier":"RRID:SCR_016124"}],"numberOfBytes":12465443,"numberOfFiles":57,"numberOfSamples":10,"numberOfSubjects":8,"variableMeasured":[],"measurementTechnique":[]},"datePublished":"2025-05-12T16:26:19.527099+00:00","schemaVersion":"0.6.9","ethicsApproval":[],"wasGeneratedBy":[],"relatedResource":[],"manifestLocation":["https://dandiarchive.s3.amazonaws.com/dandisets/001442/0.250512.1626/assets.yaml"]}
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