Register
Login
Resources
Docs Blog Datasets Glossary Case Studies Tutorials & Webinars
Product
Data Engine LLMs Platform Enterprise
Pricing Explore
Connect to our Discord channel

dandiset.yaml 9.3 KB
Raw

You have to be logged in to leave a comment. Sign In
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
  1. '@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.4/context.json
  2. about: []
  3. access:
  4. - schemaKey: AccessRequirements
  5. status: dandi:OpenAccess
  6. assetsSummary:
  7. numberOfBytes: 0
  8. numberOfFiles: 0
  9. schemaKey: AssetsSummary
  10. citation: Molen, Tjitse van der; Spaeth, Alex; Chini, Mattia; Hernandez, Sebastion;
  11. Kaurala, Gregory A; Schweiger, Hunter; Duncan, Cole; McKenna, Sawyer; Geng, Jinghui;
  12. Lim, Max; Bartram, Julian; Dendukuri, Adi; Zhang, Zongren; Gonzalez-Ferrer, Jesus;
  13. Bhaskaran-Nair, Kiran; Blauvelt, Lon; Harder, Cole R.K.; Petzold, Linda R.; Din,
  14. Dowlette Alam El; Laird, Jason; Schenke, Maren; Smirnova, Lena; Colquitt, Bradley
  15. M; Mostajo-Radji, Mohammed; Hansma, Paul K.; Teodorescu, Mircea; Hierlemann, Andreas;
  16. Hengen, Keith B.; Hanganu-Opatz, Ileana L.; Kosik, Kenneth S.; Sharf, Tal (2025)
  17. Protosequences in brain organoids model intrinsic brain states (Version draft) [Data
  18. set]. DANDI Archive. https://dandiarchive.org/dandiset/000732/draft
  19. contributor:
  20. - affiliation: []
  21. identifier: 0000-0001-6147-542X
  22. includeInCitation: true
  23. name: Molen, Tjitse van der
  24. roleName:
  25. - dcite:Author
  26. schemaKey: Person
  27. - affiliation: []
  28. identifier: 0000-0003-0702-3945
  29. includeInCitation: true
  30. name: Spaeth, Alex
  31. roleName:
  32. - dcite:Author
  33. schemaKey: Person
  34. - affiliation: []
  35. identifier: 0000-0002-5782-9720
  36. includeInCitation: true
  37. name: Chini, Mattia
  38. roleName: []
  39. schemaKey: Person
  40. - identifier: 0009-0000-8811-8596
  41. includeInCitation: true
  42. name: Hernandez, Sebastion
  43. schemaKey: Person
  44. - includeInCitation: true
  45. name: Kaurala, Gregory A
  46. schemaKey: Person
  47. - identifier: 0000-0003-0399-9481
  48. includeInCitation: true
  49. name: Schweiger, Hunter
  50. schemaKey: Person
  51. - includeInCitation: true
  52. name: Duncan, Cole
  53. schemaKey: Person
  54. - includeInCitation: true
  55. name: McKenna, Sawyer
  56. schemaKey: Person
  57. - identifier: 0000-0002-3431-9568
  58. includeInCitation: true
  59. name: Geng, Jinghui
  60. schemaKey: Person
  61. - identifier: 0009-0003-1403-7875
  62. includeInCitation: true
  63. name: Lim, Max
  64. schemaKey: Person
  65. - affiliation: []
  66. identifier: 0000-0001-7513-1716
  67. includeInCitation: true
  68. name: Bartram, Julian
  69. roleName: []
  70. schemaKey: Person
  71. - affiliation: []
  72. identifier: 0000-0001-7350-868X
  73. includeInCitation: true
  74. name: Dendukuri, Adi
  75. roleName: []
  76. schemaKey: Person
  77. - affiliation: []
  78. identifier: 0009-0001-7709-9980
  79. includeInCitation: true
  80. name: Zhang, Zongren
  81. roleName: []
  82. schemaKey: Person
  83. - identifier: 0000-0002-5588-921X
  84. includeInCitation: true
  85. name: Gonzalez-Ferrer, Jesus
  86. schemaKey: Person
  87. - affiliation: []
  88. identifier: 0000-0001-6855-8244
  89. includeInCitation: true
  90. name: Bhaskaran-Nair, Kiran
  91. roleName: []
  92. schemaKey: Person
  93. - affiliation: []
  94. identifier: 0000-0001-8352-873X
  95. includeInCitation: true
  96. name: Blauvelt, Lon
  97. roleName:
  98. - dcite:ContactPerson
  99. - dcite:DataManager
  100. schemaKey: Person
  101. - includeInCitation: true
  102. name: Harder, Cole R.K.
  103. schemaKey: Person
  104. - affiliation: []
  105. identifier: 0000-0001-6251-6078
  106. includeInCitation: true
  107. name: Petzold, Linda R.
  108. roleName: []
  109. schemaKey: Person
  110. - identifier: 0000-0002-3886-2082
  111. includeInCitation: true
  112. name: Din, Dowlette Alam El
  113. schemaKey: Person
  114. - includeInCitation: true
  115. name: Laird, Jason
  116. schemaKey: Person
  117. - includeInCitation: true
  118. name: Schenke, Maren
  119. schemaKey: Person
  120. - identifier: 0000-0003-0171-3881
  121. includeInCitation: true
  122. name: Smirnova, Lena
  123. schemaKey: Person
  124. - identifier: 0000-0001-5819-7924
  125. includeInCitation: true
  126. name: Colquitt, Bradley M
  127. schemaKey: Person
  128. - identifier: 0000-0002-1634-7514
  129. includeInCitation: true
  130. name: Mostajo-Radji, Mohammed
  131. schemaKey: Person
  132. - affiliation: []
  133. identifier: 0000-0002-0719-0615
  134. includeInCitation: true
  135. name: Hansma, Paul K.
  136. roleName: []
  137. schemaKey: Person
  138. - affiliation: []
  139. identifier: 0000-0001-7085-5248
  140. includeInCitation: true
  141. name: Teodorescu, Mircea
  142. roleName: []
  143. schemaKey: Person
  144. - affiliation: []
  145. identifier: 0000-0002-3838-2468
  146. includeInCitation: true
  147. name: Hierlemann, Andreas
  148. roleName: []
  149. schemaKey: Person
  150. - affiliation: []
  151. identifier: 0000-0001-5017-4090
  152. includeInCitation: true
  153. name: Hengen, Keith B.
  154. roleName: []
  155. schemaKey: Person
  156. - affiliation: []
  157. identifier: 0000-0002-4787-1765
  158. includeInCitation: true
  159. name: Hanganu-Opatz, Ileana L.
  160. roleName: []
  161. schemaKey: Person
  162. - affiliation: []
  163. identifier: 0000-0003-3224-5179
  164. includeInCitation: true
  165. name: Kosik, Kenneth S.
  166. roleName: []
  167. schemaKey: Person
  168. - affiliation: []
  169. includeInCitation: false
  170. name: Wang, Congwei
  171. roleName: []
  172. schemaKey: Person
  173. - affiliation: []
  174. includeInCitation: false
  175. name: Terrigno, Marco
  176. roleName: []
  177. schemaKey: Person
  178. - affiliation: []
  179. includeInCitation: false
  180. name: Jagasia, Ravi
  181. roleName: []
  182. schemaKey: Person
  183. - affiliation: []
  184. includeInCitation: false
  185. name: Vértes, Petra E.
  186. roleName: []
  187. schemaKey: Person
  188. - affiliation: []
  189. includeInCitation: false
  190. name: Mierau, Susanna B.
  191. roleName: []
  192. schemaKey: Person
  193. - affiliation: []
  194. includeInCitation: false
  195. name: Paulsen, Ole
  196. roleName: []
  197. schemaKey: Person
  198. - affiliation: []
  199. includeInCitation: false
  200. name: Eglen, Stephen J.
  201. roleName: []
  202. schemaKey: Person
  203. - affiliation: []
  204. identifier: 0000-0002-7042-5392
  205. includeInCitation: false
  206. name: Astle, Duncan E.
  207. roleName: []
  208. schemaKey: Person
  209. - affiliation: []
  210. identifier: 0000-0002-9347-9203
  211. includeInCitation: false
  212. name: Schröter, Manuel
  213. roleName: []
  214. schemaKey: Person
  215. - affiliation: []
  216. includeInCitation: false
  217. name: Yuan, Xinyue
  218. roleName: []
  219. schemaKey: Person
  220. - affiliation: []
  221. includeInCitation: false
  222. name: Obien, Marie Engelene J.
  223. roleName: []
  224. schemaKey: Person
  225. - affiliation: []
  226. includeInCitation: false
  227. name: Gong, Wei
  228. roleName: []
  229. schemaKey: Person
  230. - affiliation: []
  231. includeInCitation: false
  232. name: Kikuchi, Tetsuhiro
  233. roleName: []
  234. schemaKey: Person
  235. - affiliation: []
  236. includeInCitation: false
  237. name: Odawara, Aoi
  238. roleName: []
  239. schemaKey: Person
  240. - affiliation: []
  241. includeInCitation: false
  242. name: Noji, Shuhei
  243. roleName: []
  244. schemaKey: Person
  245. - affiliation: []
  246. includeInCitation: false
  247. name: Suzuki, Ikuro
  248. roleName: []
  249. schemaKey: Person
  250. - affiliation: []
  251. includeInCitation: false
  252. name: Takahashi, Jun
  253. roleName: []
  254. schemaKey: Person
  255. - affiliation: []
  256. identifier: 0000-0003-3773-2822
  257. includeInCitation: false
  258. name: Frey, Urs
  259. roleName: []
  260. schemaKey: Person
  261. - affiliation: []
  262. includeInCitation: false
  263. name: Nagarajan, Srikantan
  264. roleName: []
  265. schemaKey: Person
  266. - affiliation: []
  267. includeInCitation: false
  268. name: Dunn, Alexander W. E.
  269. roleName: []
  270. schemaKey: Person
  271. - affiliation: []
  272. includeInCitation: false
  273. name: Hornauer, Philipp J.
  274. roleName: []
  275. schemaKey: Person
  276. - affiliation: []
  277. includeInCitation: false
  278. name: Ronchi, Silvia
  279. roleName: []
  280. schemaKey: Person
  281. - affiliation: []
  282. includeInCitation: false
  283. name: Glasauer, Stella M. K.
  284. roleName: []
  285. schemaKey: Person
  286. - affiliation: []
  287. includeInCitation: false
  288. name: Buccino, Alessio P.
  289. roleName: []
  290. schemaKey: Person
  291. - affiliation: []
  292. includeInCitation: false
  293. name: Tovar, Kenneth R.
  294. roleName: []
  295. schemaKey: Person
  296. - affiliation: []
  297. identifier: 0000-0002-5931-0295
  298. includeInCitation: false
  299. name: Akarca, Danyal
  300. roleName: []
  301. schemaKey: Person
  302. - affiliation: []
  303. includeInCitation: false
  304. name: Fiscella, Micele
  305. roleName: []
  306. schemaKey: Person
  307. - affiliation: []
  308. includeInCitation: false
  309. name: Guzman, Elmer
  310. roleName: []
  311. schemaKey: Person
  312. - affiliation: []
  313. includeInCitation: false
  314. name: Luna, Gabriel
  315. roleName: []
  316. schemaKey: Person
  317. - affiliation: []
  318. includeInCitation: false
  319. name: Cheng, Zhuowei
  320. roleName: []
  321. schemaKey: Person
  322. - affiliation: []
  323. includeInCitation: false
  324. name: Audouard, Morgane
  325. roleName: []
  326. schemaKey: Person
  327. - affiliation: []
  328. includeInCitation: false
  329. name: Ranasinghe, Kamalini G.
  330. roleName: []
  331. schemaKey: Person
  332. - affiliation: []
  333. includeInCitation: false
  334. name: Kudo, Kiwamu
  335. roleName: []
  336. schemaKey: Person
  337. - affiliation: []
  338. identifier: 0000-0002-7899-2818
  339. includeInCitation: true
  340. name: Sharf, Tal
  341. roleName:
  342. - dcite:Author
  343. schemaKey: Person
  344. dateCreated: '2023-12-11T22:42:22.603999+00:00'
  345. description: " This data for this study consists of sourced and original data sets:\n
  346. - Human brain organoid recordings (sourced):\n - [Sharf et al. Nat. Commun. 2022](https://doi.org/10.1038/s41467-022-32115-4)\n
  347. \ - [Din D.-M.A.E. et al. BioRxiv 2024](https://doi.org/10.1101/2024.09.17.613333
  348. )\n - Primary murine cortical culture recordings (sourced):\n - [Bartram, J. et
  349. al. eLife 12, (2024)](https://doi.org/10.7554/eLife.86820.2)\n - [Yuan et al Nat.
  350. Commun. 2020](https://doi.org/10.1038/s41467-020-18620-4)\n - Murine brain organoid
  351. recordings (original)\n - Acute neonatal slice recordings from the murine somatosensory
  352. cortex (original)"
  353. ethicsApproval: []
  354. id: DANDI:000732/draft
  355. identifier: DANDI:000732
  356. keywords: []
  357. license:
  358. - spdx:CC-BY-4.0
  359. manifestLocation:
  360. - https://api.dandiarchive.org/api/dandisets/000732/versions/draft/assets/
  361. name: Protosequences in brain organoids model intrinsic brain states
  362. protocol: []
  363. relatedResource: []
  364. repository: https://dandiarchive.org
  365. schemaKey: Dandiset
  366. schemaVersion: 0.6.4
  367. studyTarget: []
  368. url: https://dandiarchive.org/dandiset/000732/draft
  369. version: draft
  370. wasGeneratedBy: []
Tip!

Press p or to see the previous file or, n or to see the next file

Comments

Loading...