DagsHub-Datasets
/
dandiarchive-dataset


  
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            {
  "PixelSize": [
    2.564,
    3.625,
    2.564
  ],
  "FieldOfView": [
    118197.836,
    7424.0,
    5251.072
  ],
  "BodyPart": "BRAIN",
  "BodyPartDetails": "entire pons",
  "BodyPartDetailsOntology": "SNOMED",
  "Environment": "exvivo",
  "SampleEmbedding": "Elastic, exandable polyacrylamide hydrogel",
  "SampleFixation": "PFA fixation followed by polyepoxy crosslinking",
  "Pathology": "no pathology",
  "SampleExtractionProtocol": "autopsy",
  "SampleExtractionInstitution": "Massachusetts General Hospital",
  "SampleStaining": "NN",
  "InstitutionName": "MIT",
  "InstitutionAddress": "43 Vassar St, Cambridge, Ma.",
  "InstitutionalDepartmentName": "Kwanghun Chung Lab",
  "ChunkTransformMatrix": [
    [
      2.564,
      0.0,
      0.0,
      0.0
    ],
    [
      0.0,
      3.625,
      0.0,
      33410.0
    ],
    [
      0.0,
      0.0,
      2.564,
      0.0
    ],
    [
      0.0,
      0.0,
      0.0,
      1.0
    ]
  ],
  "ChunkTransformMatrixAxis": [
    "X",
    "Y",
    "Z"
  ],
  "PixelSizeUnits": "um",
  "StationName": "oSPIM1",
  "Immersion": "ExPROTOS",
  "Magnification": "2x",
  "NumericalAperture": "0.1",
  "SliceThickness": "1000",
  "SamplePrimaryAntibody": "Rabbit Polyclonal Antibody to FOX3/NeuN Cat# RPCA-FOX3",
  "SampleSecondaryAntibody": "Rhodamine Red\u2122-X (RRX) AffiniPure Donkey Anti-Rabbit IgG (H+L), 711-295-152"
}