australasian-genomics-dataset/s3://threatenedspecies/Lepidodactylus_listeri

Thank you for your interest in the Lister's gecko genome produced by Australasian Genomes.

Files:
genome assembly fasta - rLeplis1.pri.20221122.fasta.gz	
genome annotations - rLeplis.fgenesh.20221122.gff3
reference-aligned global transcriptome proteins, assembled from reads from the brain, gonads and liver (x2)- rLeplis1.global.20221122.fasta.gz	

Acknowledgement:
Australasian Genomes is hosted by the Australasian Wildlife Genomics Group, The University of Sydney and is the data repository for the Threatened Species Initiative and the ARC Centre of Excellence for Innovations in Peptide and Protein Science.
This work was funded by the Threatened Species Initiative (TSI), NCRIS funded Bioplatforms Australia, and the Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science (CE200100012).
The authors would like to acknowledge the resources provided by the Pawsey Supercomputing Centre with funding from the Australian Government and the Government of Western Australia; and the Sydney Informatics Hub through use of the University of Sydney's high performance computing cluster, Artemis. TOD completed this work while undertaking a Fulbright Future Scholarship funded by the Kinghorn Foundation.
The authors thank Elspeth McLennan and Emma Peel for assistance with DNA and RNA extractions, and Merly Escalona for advice on Hi-C scaffolding. The authors thank Parks Australia for their support and ongoing efforts on the conservation of the Lister's gecko. 

Please cite the AWS ODS and the following paper if you use these resources:
Dodge, T.O., Farquharson, K.A., Ford, C., Cavanagh, L., Schubert, K., Schumer, M., Belov, K., Hogg, C.J. Genomes of two Extinct-in-the-Wild reptiles from Christmas Island reveal distinct evolutionary histories and conservation insights. BioRXiv (preprint)

Licensing:
CC-BY-4.0