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Storage Buckets

README.md

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Australasian Genomes

Stream data with DDA:

from dagshub.streaming import DagsHubFilesystem

fs = DagsHubFilesystem(".", repo_url="https://dagshub.com/DagsHub-Datasets/australasian-genomics-dataset")

fs.listdir("s3://threatenedspecies")

Description:

Australasian Genomes is the genomic data repository for the Threatened Species Initiative (TSI) and the ARC Centre for Innovations in Peptide and Protein Science (CIPPS). This repository contains reference genomes, transcriptomes, resequenced genomes and reduced representation sequencing data from Australasian species. Australasian Genomes is managed by the Australasian Wildlife Genomics Group (AWGG) at the University of Sydney on behalf of our collaborators within TSI and CIPPS.

Contact:

Australasian Genomes is the genomic data repository for the Threatened Species Initiative (TSI) and the ARC Centre for Innovations in Peptide and Protein Science (CIPPS). This repository contains reference genomes, transcriptomes, resequenced genomes and reduced representation sequencing data from Australasian species. Australasian Genomes is managed by the Australasian Wildlife Genomics Group (AWGG) at the University of Sydney on behalf of our collaborators within TSI and CIPPS.

Update Frequency:

As new genomes are produced

Managed By:

https://www.sydney.edu.au/science/our-research/research-areas/life-and-environmental-sciences/wildlife-genomics-group.html

Resources:

  1. resource:
    • Description: Data files
    • ARN: arn:aws:s3:::threatenedspecies
    • Region: ap-southeast-2
    • Type: S3 Bucket
    • Explore: Browse Bucket
  2. resource:
    • Description: Data files
    • ARN: arn:aws:s3:::koalagenomes
    • Region: ap-southeast-2
    • Type: S3 Bucket
    • Explore: Browse Bucket

Tags:

aws-pds, biology, biodiversity, conservation, genetic, genomic, life sciences, transcriptomics, wildlife

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About

australasian-genomics-dataset is originate from the Registry of Open Data on AWS

Collaborators 5

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