Annalie
/
gene-expressions


  
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            prepare:
  cmd: python gene_expressions/prepare.py data.pkl
  deps:
  - path: data/raw/actual.csv
    md5: b8d0bd345a4c32fbd81629924cffe804
    size: 511
  - path: data/raw/data_set_ALL_AML_independent.csv
    md5: 13f3c6c8c8f3369b96b5d6583ceff8c1
    size: 1860352
  - path: data/raw/data_set_ALL_AML_train.csv
    md5: 7583fdd11c5acd7b11253714265f8cd0
    size: 2039681
  - path: gene_expressions/prepare.py
    md5: 4d65988d79f0bf52b4ceb88c6ae4d9bb
    size: 4598
  outs:
  - path: data/prepared/data.pkl
    md5: 4512c1ec0b1ed91bbf7c0c42986342ff
    size: 4107520
train:
  cmd: python gene_expressions/train.py data/prepared model.pkl
  deps:
  - path: data/prepared/data.pkl
    md5: 4512c1ec0b1ed91bbf7c0c42986342ff
    size: 4107520
  - path: gene_expressions/train.py
    md5: b780f8a952fa2cf5751e5e4c39ae3a66
    size: 3917
  outs:
  - path: model/random_forest_model.pkl
    md5: b98eb0d6842fcbabaadd2e902700f6a9
    size: 175687
evaluation:
  cmd: python gene_expressions/evaluate.py ROC_AUC_curve.png Confusion_Matrix.png
  deps:
  - path: data/prepared/data.pkl
    md5: 4512c1ec0b1ed91bbf7c0c42986342ff
    size: 4107520
  - path: gene_expressions/evaluate.py
    md5: 2bf338c54f006924216dad59952f7e59
    size: 5133
  - path: model/random_forest_model.pkl
    md5: b98eb0d6842fcbabaadd2e902700f6a9
    size: 175687
  outs:
  - path: reports/metrics/eval.json
    md5: 27192e4338f62fd13e42b8e18d41bbc7
    size: 24
  - path: reports/plots/Confusion_Matrix.png
    md5: ea1ae63c2f21cbdb262e1c575b5d1b73
    size: 15878
  - path: reports/plots/ROC_AUC_curve.png
    md5: 6cdcdb0ec0ba3184bf8cc777e2abf2f5
    size: 23104