Install DagsHub:
pip install dagshubTo stream this data directly on DagsHub
from dagshub.streaming import DagsHubFilesystem
fs = DagsHubFilesystem(".", repo_url="https://dagshub.com/DagsHub-Datasets/broad-pan-ukb-dataset")
fs.listdir("s3://pan-ukb-us-east-1")Description
A multi-ancestry analysis of 7,221 phenotypes using a generalized mixed model association testing framework, spanning 16,119 genome-wide association studies. We provide standard meta-analysis across all populations and with a leave-one-population-out approach for each trait. The data are provided in tsv format (per phenotype) and Hail MatrixTable (all phenotypes and variants). Metadata is provided in phenotype and variant manifests.
Additional information
Documentation
Update frequency
Occasional
Managed by
Analytic and Translational Genetics Unit, Massachusetts General Hospital and the Broad Institute
License
CC BY-4.0 (usage may be restricted by UK Biobank, more details on the “Downloads page“)
