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DagsHub-Datasets
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ibl-brain-wide-map-dataset

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MT009
SP035
SP044
TS040
README.txt
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README.txt

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  1. This folder contains varied data for running PMD compression diagnostics on. The folders are sessions containing suite2p bin files.
    2. 

  2. 

  3. ===============================
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  4. 

  5. SP035/2023-03-03/001/alf/FOV_00
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  6. SP035/2023-03-03/001/alf/FOV_01
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  7. SP035/2023-03-03/001/alf/FOV_02
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  8. SP035/2023-03-03/001/alf/FOV_03
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  9. SP035/2023-03-03/001/alf/FOV_04
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  10. SP035/2023-03-03/001/alf/FOV_05
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  11. 

  12. 2p-RAM imaging at ~200um depth in ~VIS of Teto-GCaMP6s x Camk2a-tTA. Bog-standard data pre-processed via IBL pipeline. Each folder is a different FOV at the same z-depth.
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  13. 

  14. ===============================
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  16. SP044/2023-06-27/001/suite2p/plane6
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  17. SP044/2023-06-27/001/suite2p/plane7
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  18. SP044/2023-06-27/001/suite2p/plane8
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  19. SP044/2023-06-27/001/suite2p/plane9
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  20. SP044/2023-06-27/001/suite2p/plane10
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  21. SP044/2023-06-27/001/suite2p/plane11
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  23. 2p-RAM imaging at ~350um depth in ~VIS of Teto-GCaMP6s x Camk2a-tTA. We are in layer 4 rather than L2/3, so the somas look quite different there. SNR is pretty good. Each folder is a different FOV at the same z-depth.
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  24. 

  25. ===============================
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  27. TS040/2023-10-22/4/suite2p/plane8
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  28. TS040/2023-10-22/4/suite2p/plane9
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  29. TS040/2023-10-22/4/suite2p/plane10
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  30. 

  31. Standard 2p imaging at 400-450 um respectively (layer 5), but now in a GCaMP6s x Rbp4-Cre mouse (so GCaMP is expressed in layer 5 neurons). Each folder is a different z-plane of the same XY-scanfield, spaced 30um apart.
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  32. 

  33. ===============================
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  34. 

  35. MT009/20210830/1/suite2p/plane0
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  36. MT009/20210830/1/suite2p/plane1
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  37. MT009/20210830/1/suite2p/plane2
    38. 

  38. MT009/20210830/1/suite2p/plane3
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  39. MT009/20210830/1/suite2p/plane4
    40. 

  40. MT009/20210830/1/suite2p/plane5
    41. 

  41. 

  42. 2p-RAM imaging at ~100 to 200um depth in ~VIS of Teto-GCaMP6s x Camk2a-tTA. This data was acquired at the UCLA mesoscope. It has lower overall signal and patches of bad visibility.
    43.
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Integrate AWS S3
Use S3 remote
Select bucket
Access key
Finish

Use AWS S3 as storage!

Browsing data directories saved to S3 is possible with DAGsHub. Let's configure your repository to easily display your data in the context of any commit!

Existing keys:
s3://ibl-brain-wide-map-public
Jan 31, 2023

Specify your S3 bucket

Access key (If needed)

Congratulations!

ibl-brain-wide-map-dataset is now integrated with AWS S3!

Delete Storage Key

Are you sure you want to delete this access key?

No
Yes
Integrate Google Cloud Storage
Use Google Storage
Select bucket
Upload key
Finish

Use Google Cloud Storage!

Browsing data directories saved to Google Cloud Storage is possible with DAGsHub. Let's configure your repository to easily display your data in the context of any commit!

Specify your Google Storage bucket

Service Account Key

Congratulations!

ibl-brain-wide-map-dataset is now integrated with Google Cloud Storage!

Delete Storage Key

Are you sure you want to delete this access key?

No
Yes
Integrate Azure Cloud Storage
Use Azure Storage
Select bucket
Set key
Finish

Use Azure Cloud Storage!

Browsing data directories saved to Azure Cloud Storage is possible with DAGsHub. Let's configure your repository to easily display your data in the context of any commit!

Specify your Azure Storage bucket

Access key (If needed)

Congratulations!

ibl-brain-wide-map-dataset is now integrated with Azure Cloud Storage!

Delete Storage Key

Are you sure you want to delete this access key?

No
Yes
Integrate S3 compatible storage
Use S3 like remote
Select bucket
Access key
Finish

Use any S3 compatible storage!

Browsing data directories saved to S3 compatible storage is possible with DAGsHub. Let's configure your repository to easily display your data in the context of any commit!

Specify your S3 bucket

Bucket name cannot be the same as the repository name. Please change one of them.

Access key (If needed)

Congratulations!

ibl-brain-wide-map-dataset is now integrated with your S3 compatible storage!

Delete Storage Key

Are you sure you want to delete this access key?

No
Yes