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WGS

README.txt

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  1. In the first phase of WGS sequencing, 752 samples were sequenced, comprising
  2. 15 body sites. Of these, 690 passed our quality control screens, which
  3. included identification of outliers by mean contig & ORF density, human hits,
  4. rRNA hits and size. Reads and assemblies are available here for these 690
  5. samples.
  6. This dataset includes 35.85 billion human contaminant-screened reads in FASTQ
  7. format, which are 2.3 TB in size, compressed. Reads from each individual
  8. sample were assembled using SOAP, generating 48.3 million scaffolds with a
  9. total compressed size of 13 GB.
  10. WGS reads are referred to as "WGS". Assemblies are referred to as "PGA". Files
  11. are grouped first by body site, and then by sample identifier for download of
  12. WGS and PGA files.
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