Predicting successful CME events using only clathrin markers. 🦠📈

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readme.md

predicting auxilin spikes in clathrin-mediated endocytosis

quickstart for making new predictions

  • our fully trained model is available in the models folder

reproducibility

  • download data: download cached data after tracking from this gdrive folder - should be added to the folder data/tracks
  • process data: run python data.py to properly preprocess all the data (will cache it into the "processed folder")
  • rerun analysis: notebooks folder contains step-by-step analysis
  • tests: run tests with pytest in the tests folder

acknowledgements