General: aws-pds open-data-registry genetic genomic life sciences cancer bioinformatics biology Type: dataset Integration: git aws s3

Topics

Type dataset

General open-data-registry

Integration aws s3

General aws-pds

General sustainability

General agriculture

General earth observation

General geospatial

General life sciences

General machine learning

General climate

Data Domain computer vision

General genomic

General weather

General satellite imagery

General meteorological

General biology

Type model

General genetic

General environmental

Task disaster response

General deep learning

General bioinformatics

General hacktoberfest

Data Domain audio

General natural resource

Task classification

General imaging

Data Domain nlp

General natural language processing

General cancer

General mlops

Integration mlflow

General image processing

General health

Data Domain tabular

General oceans

General hacktoberfest 2023

Task image classification

General python

Integration dvc

General mapping

General coastal

General whole genome sequencing

General data science

Framework tensorflow

General biodiversity

General atmosphere

General covid-19

General cog

General elevation

General strides

General neuroscience

General global

General coronavirus

General neuroimaging

Integration git

General lidar

General cities

General open source software

General ecosystems

Framework pytorch

General water

General climate model

General aerial imagery

General csv

General neurobiology

Task object detection

General air quality

General astronomy

General land

General machine learning project

General archives

General transcriptomics

General urban

General data science project

General analytics

General food security

General parquet

General internet

General energy

General bam

General continuously operating reference station - cors

General gps

Framework scikit-learn

General homo sapiens

General conservation

General tutorial

General cell biology

General encyclopedic

Data Domain 3d model

General cell imaging

General stac

General fastq

General medicine

General broadcast ephemeris

General gnss

General chemistry

General json

General earthquakes

General gene expression

General census

General robotics

General infrastructure

General nara

General solar

General cyber security

General biotech blueprint

General magnetic resonance imaging

General statistics

General signal processing

General mlflow-serving

General demography

General labeled

General cnn

General protein

General reference index

General molecule

Data Domain medical imaging

Task autonomous vehicles

General ice

Task machine translation

General vcf

General neural network

General mus musculus

Task vision

General llm

General video

General multimedia

General geoscience

General genetic maps

General transportation

General chemical biology

General neurophysiology

Task information retrieval

General financial markets

General 1940 census

General computer security

General microscopy

General marine navigation

General fasta

General population genetics

General regulatory

General floods

General planetary

General biomolecular modeling

General population

General electron microscopy

General osm

General deeplearning

General streamlit

General ml pipelines

Task anomaly detection

Task time series forecasting

General data visualization

General medical

Task chatbot

General reproducibility-challenge

General wine quality prediction

General artificial-intelligence

Integration arxiv

Task semantic segmentation

General market data

General civic

General data analytics

Task denoising

General smd ai

General xgboost

General predictive analysis

Task text generation

General dagshub

General genelab

General digital preservation

General digital forensics

General government records

General amino acid

General metagenomics

General random forests

General traffic

General copyright monitoring

General survey

General seismology

General metadata

General nifti

General bathymetry

General short read sequencing

General mers

General epigenomics

General commerce

General sars

General regression

General molecular docking

General fast5

General broadband

General genome wide association study

Integration github

General fluorescence imaging

General demographics

Integration label studio

General us-dc

General blockchain

General computer forensics

General long read sequencing

Task language modelling

Task sentiment analysis

Task text classification

General transformers

General text analysis

General healthcare

General economics

General kaggle

General llms

General segmentation

General rag

General events

General research

General electrophysiology

Framework huggingface transformers

General projects

General data cleaning

General datamanipulation

General network traffic

General kidney

General music

General txt

General intrusion detection

General cars

General speech processing

Data Domain graph

General mining software repositories

General education

General deployment

General covid

General test

General trading

General movies

General forecast

General source code

General sklearn

Task music information retrieval

General space biology

General data analysis

General wildlife

General free software

General cloud computing

Task text-to-image generation

General predictive modelling

General complaints

General data

General ensemble learning

General x-ray tomography

Task speech recognition

General github actions

Task medical image segmentation

General ai personal assistant

General detection

General foldingathome

General scholarly communication

General speaker identification

General timho

General 1950 census

General benchmark

General simulations

General structural biology

General media

General space weather

General finance

General live song identification

General recombination maps

General datascience

General museum

General emotion

General hiring

General marine mammals

Data Domain reinforcement learning

Task recommendation systems

General cell painting

General radiation

General bitcoin

General whole exome sequencing

General alchemical free energy calculations

General hpc

General green aviation

General art

General turbulence

General music features dataset

General mining

General automatic speech recognition

General cultural preservation

General history

General cram

General protein template

General protein folding

General histopathology

General csi

General xml

General culture

General meta learning

General virus

General privacy

General autism spectrum disorder

General cmip5

General molecular dynamics

General enzyme

General science

General sqlite

General organelle

General low-pressure turbine

Task face recognition

General netcdf

General keras

General variant annotation

General pandas

General seafloor

Task audio classification

General mixed file dataset

General near-surface specific humidity

General ukraine

General pharmaceutical

General msa

General hydrography

General cover song identification

General ransomware

General datacenter

General marine

General japanese

General loftee

General geophysics

General tertiary analysis

General acoustics

General openfold

Task active learning

General high-throughput imaging

General fisheries

General structural variation

Task activity recognition

General pediatric

General malware

Task question answering

General computational fluid dynamics

General data assimilation

General microbiome

General vep

General near-surface air temperature

General industrial

General flask

General national archives catalog

General cmip6

General alphafold

General fewshot

General prediction

General tiles

General precipitation

General workload analysis

General geothermal

General data pipelines

General image

General pipeline

General ai voice clone app

General text

General coco

Task named entity recognition

General ai mlops

General matplotlib

General mnist

Task image generation

General price prediction

General analysis

General snowflake

General x-ray

Task depth estimation

General eda

General generative ai

Task image captioning

General ai planning

General price

General linear regression

General hebrew

General aws

General credit card

Framework pycaret

Task explainable artificial intelligence

General wine

Task object classification

General autoencoder

General gans

General huggingface

General sports

General end to end

Task text summarization

General python library

Task sequence-to-sequence language modeling

General disease

General monitoring

General chatgpt plugins

General noaa cors network - ncn

Task 3d human pose estimation

General malaria

General mammography

General medical image classification

Task zero-shot object detection

General vector embedding database

General chest cancer predition

General mlops zoomcamp

General codepeak

General chat llama

Task object detection in aerial images

General quantitative

General colab

General heroku

General chest x-ray

General cml

General vector database

General labelling

General banking

General bias

General catboost

General api

General credit card defaulter prediction

General medical terminology

General continuous integration

General transactional data

Task classification with binary neural network

General vector embeddings

General social good

General ai voice assistant

General medical classification

General java

General llama2

General web

General gender debiasing

General fire

General example

General instruction following

General docker

Task food recognition

General modular coding

Task federated learning

General dagshub as a my favourite data science tool

General jupyter notebook

General aiops

General bento ml

General version control

Task text matching

General toy

General gradient boosting

General julia

Task video object segmentation

General npc

General spider

Task reading comprehension

General elasticnet

General news

Task time series

General customer churn

General annotations

General customer sentiment analysis

General nltk

General fastai

General evidently

Task music generation

General database

General zomato

General machine

General numeric arrays

General unet

Task automl

Integration bitbucket

Task pedestrian detection

Task text-to-speech synthesis

General convolutional neural network

General numpy

Task minecraft

General ml deployment

General python pakage

General mri

General bot

General master

Framework ultralytics yolo

General loan application

Task real-time object detection

General data mining

General its

General weather impacts

General fitnes

General gru

Task meta-learning

General script

General epu index

General notebook

General naive bayes

General pytest

General giskard

General seaborn

General ditmodel

General interpretability

General seaborg

General data version control

General emoji

General radiometric data

General paper

General cognitive control

General evaluation

Task clustering algorithms evaluation

General assistant

General swiggy

General alguae

Task object recognition

General scw

Task time series analysis

General optical coherence tomography

General nextjs

Task gesture recognition

General bug localization

General credit card default prediction

General bark

General individuals

General sea

Task face sketch synthesis

General siamese network

General fastapi

Task scientific document summarization

Task transfer learning

General devices

General development

General ner

General the blogger

General chexnet

General number recognition

Task object skeleton detection

General man naked on ice

Task license plate recognition

General tinyml

Task text-image retrieval

General scientific documents

General understanding

General chest disease

General ai voice cloning

General disease classification

General short

General xyz analysis

General vessel segmentation

General pytorch2

General unit testing

General notes

General bark voice clone

General datellite imagery

General titanic

General obesity

General cell segmentation

General telecom

General engineer

General awesome list

General mongodb

General illegal deforestation

Task data augmentation

General vsdvsdvsdvssf

General finite element method

General histological segmentation

Task object counting

General cracks and potholes

General 2022 data science related notes

Task face identification

General portfolio

General minecraft circle generator

General http traffic data

Task dimensionality reduction

Task face reenactment

General semantic search

General project

General shopping

Task learning-to-rank

General trial

General oracle

General bug

General books

Task rgb-d salient object detection

Task domain generalization

General visualization

General asv

Task colorization

General academic

Task news classification

General fdffwfwf

General forest

General seo

General forecasting

General lora

General baseline

General coronary plaque analysis

General smiles

General kyc

General face shape classification for improving styling

General reviewer recommendation

General movie

General car service

General digital marketing

General liberia

General insurance

Task answer selection

General singapore

General documents

General flood prediction

General 2023 data science collection repo

General product webscraping on food systesms

General accidents

General art generation

General naive-bayes

General game

General vscode

General skeleton

Task network embedding

General credit card risk

General pil

General fashion images

General edema

General dynamic time warpping

General seagrass

General exercise videos

General video-object-segmentatino

Framework jax

General torchdata

General sdw

General lstm

General hyperspectral imaging

General image complexity

General tim ho

Task fine-grained image classification

General hello-world

General runners

Task link prediction

General ecr

General production optimization

General fdfwsf

General first

Task table detection

General sometopic

General challenge

General apple

General designing

General malware detection

Task covid- diagnosis

General agents

General suicide rates analysis

Task 3d pose estimation

General happy

General mode

General instruct chatgpt

General bark voice cloning

General trip

General wdl

General tiger

General moldova

General supermarket website scraping

General discord

General latent diffusion models

Task visual question answering

General credit finance fraud

General cps

General beginner

General chatgpt

General data streaming

Task style transfer

General jitter click test

General spam-classifier

General tarantula

General olympics

General extract mfccs

General gemini

Task machine reading comprehension

General dataframe

General precious stones

General wav

General minecraft shapes

General kagle

General churn

General webapps

General man is nervous

General azure

General tasks

General manipu

General africa

General albumentations

General computing

General stroke prediction

General document image

General text-to-video

Task word embeddings

General violence detection

Task audio source separation

General best pune escorts

General heart valve prosthesis

General shap

General argument

General alpaca

General clot

General covid19 vaccine

General msr

Integration jenkins

General triplet loss

General generative design

General sad

General time prediction

General get data

General html

General cloud

General quack

General credit-risk

General plant

General adsadad asdsadsa -dsadsadsadasdasdasdasdasd

General ctr

General payments

General food time delivery

General parser

General lungs

Task few-shot learning

General dsd

General large language mode

Task domain adaptation

Task content-based image retrieval

General anaomaly detection

General omdena-milan chapter mirrored from github repo

General classifier

General ai4 sustainable agri-food

General bank

General diabetes

Task face reconstruction

General type

General discount

General dinosaurs

General recipe

General taxi fare prediction

Framework flax

General sdsd

Task biomedical information retrieval

General data review

General vaccine

General mosquito

Task face verification

General javaml

General skimage

Task sentence embeddings

General new upcoming data science projects for 2020

General inventory turnover

General eye

General representation learning

Task image-to-image translation

General optimization

General ec2

General defaulter

Task sentence classification

Task generalized zero-shot learning

General voice enabled

General duckdb

General insect

General soup

General speech

Framework langchain

Task visual tracking

General neutral

General video-object-segmentation

General object

Task neural architecture search

General language

General cybersecurity

General mouse

General soccer

Task feature engineering

General security

General default customer

General code review

General exp

General airflow

General deno

General wealth

General fraud

General remote working file system

Task pose estimation

General pune escorts services

General openai

General data extraction of deed of trust

General image to audio

Task speech enhancement

General yvual

General house

General mikrocontrollers

General gis data

General gaming

General vls

General phitoplankton

General tumo

General women

General dental

General integration

General power bi

General prevention

General scorecard

General marketing analytics

Task aesthetics quality assessment

General reels

Task autonomous driving

Task face model

Task classification with binary weight network

Task panoptic segmentation

General alzheimers

General jigsaw

General diffusion

Task natural language understanding

General query

General detection of gaps

General mlpipelines

General wordle

Task multi-label text classification

General similarity detection

General computer-aided design

General orchest

General healt

General author dwaipayan chakroborti

General random sampling

General futbol

Task brain tumor segmentation

General ggs

General man is ugli

Task face detection

General dubai

General vascular tissue engineering

General friendship

General clustering

Task network intrusion detection

Task edge detection

General gradio

Task hand gesture recognition

General tutorials

General open-cv

General action video games

General yolov8

General imporoving logistics and optimizing routing

General triathlon

Task pedestrian attribute recognition

General coding

General microcontroller

General marketing

General modern portfolio theory

General chest cancer

General minecraft blocks

General pickle

General digital pathology

General fauna

Task remote sensing image classification

General animals

Task document layout analysis

Task salient object detection

General preverified

General snails

General book

General contrastive loss

General explainable ai

Task multi-task learning

General physics

General neural search

General food

General agent

General tactical decision

General cat

General engine

General oci

General sql

General moez

Task music classification

General dialogpt bot

General search

General parkinson disease

Task open information extraction

General weights and biases

General abc analysis

General corpus

Task human robot interaction

Task part-of-speech tagging

Task event extraction

Task semantic correspondence

Task anomaly detection in surveillance videos

Task sketch-based image retrieval

Task imitation learning

Task robust object detection

Task cross-view image-to-image translation

General newreposistory for to learning - how dagshub works

Task visual place recognition

Task person search

Task deblurring

Task semi-supervised image classification

Task audio tagging

Task semantic similarity

Task metric learning

Task face alignment

Task weakly supervised action localization

Task hyperspectral image classification

Task homography estimation

Task multimodal machine translation

Task real-time strategy games

Task motion segmentation

Task multi-label classification

Task document ranking

Task discourse parsing

Task emotion recognition in conversation

Task tumor segmentation

Task image matting

Task real-time semantic segmentation

Task semantic role labeling

Task spoken language understanding

Task vision-language navigation

Task open-domain question answering

Task image compression

Task mathematical question answering

Task 3d absolute human pose estimation

Task visual object tracking

Task dense pixel correspondence estimation

Task video frame interpolation

Task visual navigation

Task cross-lingual transfer

Task word sense disambiguation

Task knowledge graphs

Task unsupervised anomaly detection

Task scene text detection

Task speech separation

Task genre classification

Task multi-document summarization

Task sarcasm detection

Task crowd counting

Task semantic textual similarity

Task colorectal polyps characterization

Task 3d object tracking

Task keyword spotting

Task video captioning

Task matrix completion

Task continuous control

Task out-of-distribution detection

Task 3d pose estimation using rgb

Task video super-resolution

Task multi-person pose estimation

Task sign language translation

Task multivariate time series forecasting

Task 3d object detection

Task action recognition

Task low-light image enhancement

Task video retrieval

Task fine-grained visual categorization

Task data-to-text generation

Task face swapping

Task audio generation

Task multimodal sentiment analysis

Task video recognition

Task cross-modal retrieval

Task scene classification

Task unsupervised facial landmark detection

Task region proposal

Task fact verification

Task table-to-text generation

Task conditional image generation

Task hand segmentation

Task keypoint detection

Task image/document clustering

Task continual learning

Task image super-resolution

Task source code summarization

Task keyword extraction

Task weakly-supervised semantic segmentation

Task rectification

Task acoustic scene classification

Task video-based person re-identification

Task text style transfer

Task weakly-supervised named entity recognition

Task video prediction

Task fact checking

Task atari games

Task multi-future trajectory prediction

Task lesion segmentation

Task automated theorem proving

Task topic models

Task synthetic-to-real translation

Task natural language inference

Task activity detection

Task sign language recognition

Task dialogue generation

Task slot filling

Task scientific results extraction

Task graph representation learning

Task language identification

Task coreference resolution

Task 3d pose estimation using rgbd

Task lipreading

Task action unit detection

Task opinion mining

Task multi-object tracking

Task chinese named entity recognition

Framework spacy

Task autonomous navigation

Task grammatical error correction

Task density estimation

Integration new relic

Task entity linking

Task stance detection

Task disparity estimation

Task self-supervised learning

Task event-based vision

Task transliteration

Task self-driving cars

Integration gitlab

Task cross-lingual ner

Task video summarization

Task facial expression recognition

Task math word problem solving

Task click-through rate prediction

Task video reconstruction

Task causal inference

Task bayesian inference

Task image inpainting

Task image stitching

Task music transcription

Task temporal action localization

Task constituency parsing

Task 3d action recognition

Task program repair

Task one-shot learning

Task drug discovery

Task visual dialog

Task multi-class classification

Task conversational response selection

Task trajectory prediction

Task question generation

Task visual odometry

Task latent variable models

Task quantization

Task graph regression

Task entity typing

Task image enhancement

Task human detection

Task dictionary learning

Task stereo matching hand

Task eye tracking

Task speaker diarization

Task emotion classification

Task defect detection

Task multiple instance learning

Task knowledge base question answering

Task bias detection

Task unsupervised image classification

Task graph clustering

Task kg-to-text generation

Task outlier detection

Task scene recognition

Task scene text recognition

Task semantic parsing

Task action detection

Task text-to-sql

Task nested named entity recognition

Task sentence embedding

Task 3d instance segmentation

Task grasp contact prediction

Task entity disambiguation

Task vehicle re-identification

Task person re-identification

Task video understanding

Task color constancy

Task virtual try-on

Task intent detection

Task knowledge graph completion

Task core set discovery

Task monocular 3d object detection

Task code search

Task scene segmentation

Task paraphrase generation

Task curriculum learning

Task self-supervised action recognition

Task abusive language

Task network pruning

Task structured prediction

Task goal-oriented dialog

Task lexical entailment

Task action recognition in videos

Task emotion recognition

Task probabilistic deep learning

Task scene graph detection

Task graph matching

Task 3d multi-person pose estimation

Task image registration

Task common sense reasoning

Task lesion classification

Task offline rl

Task vision and language navigation

Task unsupervised machine translation

Task few-shot image classification

Task multimodal activity recognition

Task 3d reconstruction

Task hate speech detection

Task change point detection

Task human action generation

Task face anti-spoofing

Task image restoration

Task small data image classification

Task scene text

Task online multi-object tracking

Task video generation

Task gaze estimation

Task imputation

Task interactive segmentation

Task retinal vessel segmentation

Task paraphrase identification

Task animal pose estimation

Task code generation

Task whole slide images

Task saliency prediction

Task 3d hand pose estimation

Task color image denoising

Task abstractive text summarization

Task scene flow estimation

Task sound event detection

Task referring expression segmentation

Task multimodal unsupervised image-to-image translation

Task structure from motion

Task image quality assessment

Task lane detection

Task weakly supervised object detection

Task head pose estimation

Task compositional zero-shot learning

Task automatic post-editing

Task cross-lingual question answering

Task passage retrieval

Task visual reasoning

Task misinformation

Task abnormal event detection in video

Task zero-shot learning

Task action quality assessment

Task patch matching

Task general reinforcement learning

Task ssim

Task stochastic optimization

Task multi-agent reinforcement learning

Task action localization

Task weather forecasting

Task trajectory forecasting

Task relation classification

Task morphological analysis

Task saliency detection

Task 3d shape reconstruction

Task adversarial attack

Task video inpainting

Task feature selection

Task fine-grained visual recognition

Task multiple object tracking

Task point cloud registration

Task novel view synthesis

Task dense video captioning

Task unsupervised domain adaptation

Task monocular depth estimation

Task 3d face animation

Task product recommendation

Task 3d multi-object tracking

Task stereo matching

Task egocentric activity recognition

Task partial domain adaptation

Task super-resolution

Task 3d semantic segmentation

Task robot navigation

Task hand pose estimation

Task starcraft

Task joint entity and relation extraction

Task contrastive learning

Task computed tomography (ct)

Task fake news detection

Task 3d shape representation

Task graph generation

Task optical character recognition

Task single image dehazing

Task graph classification

Task facial landmark detection

Task scene generation

Task human-object interaction detection

Task node classification

Task handwriting generation

Task community detection

Task video object detection

Task dialogue understanding

Task music modeling

Task video segmentation

Task video classification

Task human part segmentation

Task jpeg artifact correction

Task chinese reading comprehension

Task simultaneous localization and mapping

Task motion prediction

Task 3d object recognition

Task decision making

Task semi-supervised video object segmentation

Task action anticipation

Task action classification

Task video salient object detection

Task music source separation

Task image retrieval

Task chunking

Task optical flow estimation

Task 3d human reconstruction

Framework tf lite

Task image dehazing

Task text simplification

Task tokenization

Task rgb salient object detection

Task 3d point cloud classification

Task depression detection

Task dialogue state tracking

Task relation extraction

Task depth completion

Task aspect-based sentiment analysis

Task object tracking

Data Domain point cloud

Task eeg

Task traffic sign recognition

Task action segmentation

Task action spotting

Task graph embedding

Task binarization

Task image clustering

Task image cropping

Task video description

Task intent classification

Task relational reasoning

Task face presentation attack detection

Task object localization

Task visual localization

Task unsupervised object segmentation

Task document summarization

Task incremental learning

Task deepfake detection

Task feature importance

Task community question answering

Task task-oriented dialogue systems

Task instance segmentation

Task gaussian processes

Task unsupervised video object segmentation

Task abuse detection

Task skeleton based action recognition

Task video semantic segmentation

Task variational inference

Task scene understanding

Task video question answering

Integration s3 compatible storage

Task compressive sensing

Task robotic grasping

Task dependency parsing

Task boundary detection

Task image denoising

Task motion capture

Task handwriting recognition

Task fairness

Task motion estimation

Task document classification

Task age estimation

Task long-tail learning

Task adversarial defense

Integration google cloud storage

Task speech synthesis

Task line segment detection

Task node clustering

Task clique prediction

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s3://gatk-test-data

DagsHub Storage

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GATK Test Data

Stream data with DDA:

from dagshub.streaming import DagsHubFilesystem

fs = DagsHubFilesystem(".", repo_url="https://dagshub.com/DagsHub-Datasets/gatk-test-data-dataset")

fs.listdir("s3://gatk-test-data")

Description:

The GATK test data resource bundle is a collection of files for resequencing human genomic data with the Broad Institute's Genome Analysis Toolkit (GATK).

Contact:

The GATK test data resource bundle is a collection of files for resequencing human genomic data with the Broad Institute's Genome Analysis Toolkit (GATK).

Update Frequency:

Every 3 months

Managed By:

Broad Institute

Resources:

resource:
- Description: The contents of this dataset is multi-modal and includes various types of genomic data, such as CRAMs/BAMs, whole-genome sequencing (WGS) data, exome data, RNA data, etc.
- ARN: arn:aws:s3:::gatk-test-data
- Region: us-east-1
- Type: S3 Bucket

Tags:

aws-pds, biology, bioinformatics, cancer, genetic, genomic, life sciences

Tools & Applications:

tools & applications:
- Title: Genomics Workflows on AWS - Cromwell on AWS
- URL: https://docs.opendata.aws/genomics-workflows/orchestration/cromwell/cromwell-examples/#real-world-example-haplotypecaller
- AuthorName: W. Lee Pang
- AuthorURL: https://www.linkedin.com/in/lee-pang-a039a26/

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