Jdbermeo
/
ML4HC_Project_2


  
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            stages:
  create_cv_folds:
    cmd: python training/create_folds.py --config_file_path config.yml
    deps:
    - config.yml
    - data/human_dna_train_split.csv
    - training/create_folds.py
    outs:
    - training_data/humans/train/input_data_split
    metrics:
    - training/metrics/create_folds_metrics.json:
        cache: false

  generate_kmers_vectors:
    cmd: python training/generate_kmers.py --config_file_path config.yml
    deps:
    - config.yml
    - training/generate_kmers.py
    - training_data/humans/train/input_data_split
    outs:
    - training_data/humans/train/kmer_vectors
    metrics:
    - training/metrics/generate_kmers_metrics.json:
        cache: false